Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 RNU6-578P-201ENST00000390980 103 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 AL451046.2-201ENST00000403074 277 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 RNU6-1299P-201ENST00000516316 100 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 SNORD116-25-201ENST00000516517 92 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 RNU6-250P-201ENST00000516958 103 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.42□□□□□ -2.02
ZNF428Q96B54 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZNF428Q96B54 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ZNF428Q96B54 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ZNF428Q96B54 MIR7-2-201ENST00000384970 110 ntBASIC2.41□□□□□ -2.02
ZNF428Q96B54 MIR9-3-201ENST00000385084 90 ntBASIC2.41□□□□□ -2.02
ZNF428Q96B54 SUMO2P16-201ENST00000519475 264 ntBASIC2.41□□□□□ -2.02
ZNF428Q96B54 AC109810.1-201ENST00000534066 224 ntBASIC2.41□□□□□ -2.02
ZNF428Q96B54 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ZNF428Q96B54 MIR8063-201ENST00000621930 81 ntBASIC2.41□□□□□ -2.02
ZNF428Q96B54 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.41□□□□□ -2.02
ZNF428Q96B54 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZNF428Q96B54 RNU4-84P-201ENST00000364200 139 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 SNORD24-201ENST00000383884 75 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 Y_RNA.587-201ENST00000391210 103 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 AL606845.1-201ENST00000404881 255 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 Y_RNA.622-201ENST00000411091 108 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 Y_RNA.797-201ENST00000515977 94 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 RNU6-902P-201ENST00000517212 91 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 AC097639.2-201ENST00000603159 172 ntBASIC2.4□□□□□ -2.03
ZNF428Q96B54 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ZNF428Q96B54 Y_RNA.432-201ENST00000384087 111 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 SNORA20-201ENST00000384662 132 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 AC015922.2-201ENST00000435593 184 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 SNORD13-201ENST00000459299 104 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 AC108729.3-201ENST00000513484 108 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 RNU6-365P-201ENST00000517113 106 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 Pinc.1-201ENST00000616452 154 ntBASIC2.39□□□□□ -2.03
ZNF428Q96B54 RNU6-426P-201ENST00000516464 97 ntBASIC2.38□□□□□ -2.03
ZNF428Q96B54 RNU6-504P-201ENST00000516568 104 ntBASIC2.38□□□□□ -2.03
ZNF428Q96B54 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF428Q96B54 AL049861.1-201ENST00000603130 150 ntBASIC2.38□□□□□ -2.03
ZNF428Q96B54 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF428Q96B54 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ZNF428Q96B54 SNORA26.9-201ENST00000391322 122 ntBASIC2.37□□□□□ -2.03
ZNF428Q96B54 SNRPGP14-201ENST00000435400 219 ntBASIC2.37□□□□□ -2.03
ZNF428Q96B54 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF428Q96B54 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF428Q96B54 MIR4778-201ENST00000577635 80 ntBASIC2.37□□□□□ -2.03
ZNF428Q96B54 MIR4255-201ENST00000579351 72 ntBASIC2.37□□□□□ -2.03
ZNF428Q96B54 GHRLOS.1-201ENST00000610995 70 ntBASIC2.37□□□□□ -2.03
ZNF428Q96B54 AL121890.5-201ENST00000620848 304 ntBASIC2.37□□□□□ -2.03
ZNF428Q96B54 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ZNF428Q96B54 Y_RNA.23-201ENST00000362496 106 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 RNU6-151P-201ENST00000364158 107 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 RNU6-268P-201ENST00000364174 107 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 SNORA1.2-201ENST00000365189 134 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 RNU6-1067P-201ENST00000384752 107 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.36□□□□□ -2.03
ZNF428Q96B54 SNRPGP8-201ENST00000454064 226 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.36□□□□□ -2.03
ZNF428Q96B54 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 AC024614.2-201ENST00000577584 372 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.36□□□□□ -2.03
ZNF428Q96B54 MIR3937-201ENST00000580135 106 ntBASIC2.36□□□□□ -2.03
ZNF428Q96B54 SNORD45.3-201ENST00000363836 72 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 SNORA16.1-201ENST00000364597 132 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 RNY1P5-201ENST00000383890 115 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 MIR489-201ENST00000384923 84 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 MIR569-201ENST00000385228 96 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 AL627390.1-201ENST00000396055 340 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 AC006461.1-201ENST00000412637 326 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 AC108667.1-201ENST00000428618 249 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 AC005908.1-201ENST00000468701 347 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 AC084768.2-201ENST00000622736 221 ntBASIC2.35□□□□□ -2.03
ZNF428Q96B54 Y_RNA.91-201ENST00000363042 107 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 RNU6-457P-201ENST00000363999 107 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 RNU6-768P-201ENST00000384683 107 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 Y_RNA.580-201ENST00000391004 95 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF428Q96B54 RPL31P63-201ENST00000422565 375 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 AC087499.4-201ENST00000448505 178 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 AC005840.1-201ENST00000498412 377 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 RNU6-1053P-201ENST00000515930 101 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 RNU7-43P-201ENST00000516554 64 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 MIR4285-201ENST00000581001 85 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 MIR4781-201ENST00000585250 76 ntBASIC2.34□□□□□ -2.03
ZNF428Q96B54 RNU6-312P-201ENST00000364629 107 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 RNU4-11P-201ENST00000365287 132 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 Y_RNA.370-201ENST00000365589 108 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 RNU6-484P-201ENST00000384016 107 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 RNU2-70P-201ENST00000410718 179 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 SNRPGP13-201ENST00000442212 177 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 AL392103.1-201ENST00000447000 198 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 AL121914.1-201ENST00000450188 156 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 RNU6-197P-201ENST00000516680 100 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 AC090142.3-201ENST00000519012 385 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 MIR4431-201ENST00000579990 94 ntBASIC2.33□□□□□ -2.04
ZNF428Q96B54 RNU6-704P-201ENST00000364162 103 ntBASIC2.32□□□□□ -2.04
ZNF428Q96B54 Y_RNA.215-201ENST00000364204 112 ntBASIC2.32□□□□□ -2.04
ZNF428Q96B54 RNA5SP190-201ENST00000365222 118 ntBASIC2.32□□□□□ -2.04
ZNF428Q96B54 SNORA25.12-201ENST00000516202 82 ntBASIC2.32□□□□□ -2.04
ZNF428Q96B54 RNU7-121P-201ENST00000516604 62 ntBASIC2.32□□□□□ -2.04
ZNF428Q96B54 RNU6-1116P-201ENST00000517269 99 ntBASIC2.32□□□□□ -2.04
ZNF428Q96B54 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms