Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SNORD116-18-201ENST00000383961 92 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 AL603908.1-201ENST00000406098 201 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
RFT1Q96AA3 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 AL121914.1-201ENST00000450188 156 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 AL049830.1-201ENST00000468034 425 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 RNU7-200P-201ENST00000516105 62 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 RNU6-165P-201ENST00000517170 99 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RFT1Q96AA3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 SNORD77.4-201ENST00000516158 81 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 RNU7-121P-201ENST00000516604 62 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 uc_338.4-201ENST00000616635 176 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 MIR7843-201ENST00000622274 79 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
RFT1Q96AA3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RFT1Q96AA3 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 RNU6-457P-201ENST00000363999 107 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 RNU6-312P-201ENST00000364629 107 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 SNORD50B-201ENST00000364995 70 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 RNU6-643P-201ENST00000384018 107 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 RNU6-768P-201ENST00000384683 107 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 AC006461.1-201ENST00000412637 326 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 MLLT10P1-201ENST00000418346 262 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.19□□□□□ -2.22
RFT1Q96AA3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.19□□□□□ -2.22
RFT1Q96AA3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.19□□□□□ -2.22
RFT1Q96AA3 RNU6-917P-201ENST00000516294 104 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 SNORD116-25-201ENST00000516517 92 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 RNU7-149P-201ENST00000516739 59 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 AC090049.2-201ENST00000550377 109 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 MIR4431-201ENST00000579990 94 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 MIR5688-201ENST00000580619 83 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 AC008507.4-201ENST00000585464 127 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.19□□□□□ -2.22
RFT1Q96AA3 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 RNU6-978P-201ENST00000364371 103 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 U8.5-201ENST00000364528 136 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 SNORA2.2-201ENST00000365473 135 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 RNU6-746P-201ENST00000384112 109 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 Y_RNA.580-201ENST00000391004 95 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 RNA5SP496-201ENST00000391240 109 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 RNU4-43P-201ENST00000410628 137 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 SNRPGP14-201ENST00000435400 219 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.18□□□□□ -2.22
RFT1Q96AA3 RNU7-12P-201ENST00000516030 62 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 AC007751.1-201ENST00000529260 376 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.18□□□□□ -2.22
RFT1Q96AA3 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 MIR4762-201ENST00000585261 75 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 AC120024.3-201ENST00000603167 156 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 MIR8065-201ENST00000620577 100 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 AC027279.3-201ENST00000625055 122 ntBASIC1.18□□□□□ -2.22
RFT1Q96AA3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 MIR548A2-201ENST00000384956 97 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 RNU6-239P-201ENST00000390990 99 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 RNU6-131P-201ENST00000391144 107 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 CYCTP-201ENST00000504253 315 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 MIR4303-201ENST00000581299 66 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 Pinc.1-201ENST00000616452 154 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
RFT1Q96AA3 MIR376A2-201ENST00000636782 80 ntBASIC1.17□□□□□ -2.22
RFT1Q96AA3 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU6-833P-201ENST00000363486 107 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU6-151P-201ENST00000364158 107 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU4-11P-201ENST00000365287 132 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU6-728P-201ENST00000365375 104 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNY3P5-201ENST00000384127 102 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 MIR569-201ENST00000385228 96 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 MIR548M-201ENST00000408260 86 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 AL591806.2-201ENST00000433122 173 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 AC114811.1-201ENST00000507207 168 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU6-322P-201ENST00000516010 103 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU6-197P-201ENST00000516680 100 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 Y_RNA.703-201ENST00000516846 111 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 AC097639.2-201ENST00000603159 172 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 JPX_2.1-201ENST00000614161 69 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
RFT1Q96AA3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
RFT1Q96AA3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms