Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 MIR548J-201ENST00000408833 112 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 RNU7-62P-201ENST00000458856 62 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 C8orf59P2-201ENST00000603441 271 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 AL355297.3-201ENST00000604082 446 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-40-201ENST00000606510 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 MIR376A1-201ENST00000616574 68 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 AC007485.1-201ENST00000616755 206 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 AC112487.2-201ENST00000637950 304 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 Y_RNA.112-201ENST00000363250 102 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 RNU6-1138P-201ENST00000365359 106 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 RNU6-102P-201ENST00000384485 104 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 Y_RNA.579-201ENST00000390939 94 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 RNU6-383P-201ENST00000410864 94 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 HSPE1P25-201ENST00000455484 251 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 AC091959.1-201ENST00000495857 238 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 MIR6788-201ENST00000618842 66 ntBASIC0.32□□□□□ -2.36
UFD1Q92890 RNA5SP496-201ENST00000391240 109 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 Y_RNA.602-201ENST00000410535 92 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.31□□□□□ -2.36
UFD1Q92890 BTF3P11-201ENST00000426582 477 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.31□□□□□ -2.36
UFD1Q92890 MRPS35P2-201ENST00000508242 191 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 RNU6-507P-201ENST00000516045 100 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 RNU6-496P-201ENST00000516145 99 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 Y_RNA.666-201ENST00000516187 112 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 MIR151B-201ENST00000584249 96 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AL049861.1-201ENST00000603130 150 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AP000942.4-201ENST00000604811 241 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AC020891.4-201ENST00000605745 93 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 AC013791.1-201ENST00000616619 62 ntBASIC0.31□□□□□ -2.36
UFD1Q92890 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
UFD1Q92890 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 Y_RNA.14-201ENST00000362415 103 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 RNU4-90P-201ENST00000362773 141 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 SNORD115-28-201ENST00000363931 81 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 SNORA63C-201ENST00000364578 129 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 Y_RNA.424-201ENST00000384063 103 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 Y_RNA.445-201ENST00000384168 102 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 Y_RNA.569-201ENST00000384749 103 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
UFD1Q92890 MTCO1P5-201ENST00000433573 344 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 AC092628.1-201ENST00000436250 252 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 AC087499.4-201ENST00000448505 178 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 RNU7-56P-201ENST00000458744 62 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 AC082651.2-201ENST00000496833 166 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 RNU6-397P-201ENST00000516226 104 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 RNU6-958P-201ENST00000516995 106 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 AC007751.1-201ENST00000529260 376 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 uc_338.6-201ENST00000613544 171 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 MIR6734-201ENST00000621166 68 ntBASIC0.3□□□□□ -2.36
UFD1Q92890 Y_RNA.183-201ENST00000363882 113 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 SNORA63.7-201ENST00000365579 123 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 MIR499A-201ENST00000384903 122 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 SNORD115-46-201ENST00000390982 71 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 AC098934.3-201ENST00000430450 190 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 MTND5P20-201ENST00000448677 143 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.29□□□□□ -2.36
UFD1Q92890 RNU7-73P-201ENST00000458743 63 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 Y_RNA.637-201ENST00000459424 114 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 Y_RNA.715-201ENST00000517082 110 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.29□□□□□ -2.36
UFD1Q92890 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.29□□□□□ -2.36
UFD1Q92890 uc_338.22-201ENST00000622722 187 ntBASIC0.29□□□□□ -2.36
UFD1Q92890 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
UFD1Q92890 MIR367-201ENST00000362299 68 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 SNORD38B-201ENST00000384690 67 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 RNU6-913P-201ENST00000390913 95 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 SNORA40.5-201ENST00000391061 128 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 RNA5SP247-201ENST00000411181 105 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.28□□□□□ -2.36
UFD1Q92890 MTND3P22-201ENST00000510932 243 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 SNORD77.4-201ENST00000516158 81 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 MIR6740-201ENST00000618268 113 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 AC090574.1-201ENST00000623186 233 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 SNORD38B-202ENST00000625943 69 ntBASIC0.28□□□□□ -2.36
UFD1Q92890 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
UFD1Q92890 AC010332.2-201ENST00000613083 1904 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 Y_RNA.587-201ENST00000391210 103 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 RNU6-938P-201ENST00000411285 103 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 Y_RNA.639-201ENST00000458981 102 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 RNA5SP220-201ENST00000516298 104 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 Y_RNA.702-201ENST00000516843 96 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 MIR5692C2-201ENST00000577959 77 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 MIR4724-201ENST00000579485 89 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 MIR4662B-201ENST00000579498 81 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 MIR4795-201ENST00000584182 89 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 AL512605.2-201ENST00000592972 256 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms