Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 U4.2-201ENST00000618561 85 ntBASIC-0.52□□□□□ -2.49
TOPBP1Q92547 AC112487.2-201ENST00000637950 304 ntBASIC-0.52□□□□□ -2.49
TOPBP1Q92547 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 AL603910.2-201ENST00000407268 136 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 AC024405.2-202ENST00000532731 184 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 MIR4752-201ENST00000579672 72 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 NBR2-204ENST00000587322 63 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 AL670379.3-201ENST00000605040 251 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 AC005014.2-201ENST00000607795 599 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 AC244669.1-204ENST00000621564 178 ntBASIC-0.53□□□□□ -2.49
TOPBP1Q92547 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU6-483P-201ENST00000384088 108 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 MIR215-201ENST00000384858 110 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 SNORD12C-201ENST00000386307 89 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU6-913P-201ENST00000390913 95 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 MTCO3P40-201ENST00000392516 676 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU6-566P-201ENST00000516790 107 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 MIR3942-201ENST00000585264 109 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 MIR8066-201ENST00000617280 78 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU4-75P-201ENST00000364621 146 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU6-155P-201ENST00000516347 100 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 RNU6-273P-201ENST00000516937 96 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 MIR3152-201ENST00000579801 74 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 AC018462.2-201ENST00000605375 395 ntBASIC-0.54□□□□□ -2.5
TOPBP1Q92547 SNORD115-34-201ENST00000362441 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-12-201ENST00000362583 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-29-201ENST00000362834 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-9-201ENST00000362912 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-21-201ENST00000362963 81 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-14-201ENST00000363090 81 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 RNU6-403P-201ENST00000363163 104 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-13-201ENST00000363358 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-11-201ENST00000363616 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-5-201ENST00000363633 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-39-201ENST00000363694 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-4-201ENST00000363810 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-16-201ENST00000363887 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-6-201ENST00000363942 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-42-201ENST00000364273 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORA1.1-201ENST00000364671 133 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-15-201ENST00000364809 81 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-1-201ENST00000364961 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-26-201ENST00000365067 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-10-201ENST00000365073 81 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-43-201ENST00000365503 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-36-201ENST00000365629 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORA40.5-201ENST00000391061 128 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 MTATP6P19-201ENST00000413797 659 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 MTND2P22-201ENST00000444325 1033 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 RNU7-115P-201ENST00000516433 55 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 RNU6-504P-201ENST00000516568 104 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 MIR5706-201ENST00000579841 80 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 MIR4639-201ENST00000584938 69 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 AC060780.3-201ENST00000589464 80 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 AC011921.3-201ENST00000605540 361 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 SNORD115-40-201ENST00000606510 82 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.55□□□□□ -2.5
TOPBP1Q92547 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 RNU6-161P-201ENST00000363051 106 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 RNU6-20P-201ENST00000384106 107 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 MIR1278-201ENST00000408753 81 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 RPL39P25-201ENST00000449384 154 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 RNU2-60P-201ENST00000517290 128 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 AC092447.9-201ENST00000603395 144 ntBASIC-0.56□□□□□ -2.5
TOPBP1Q92547 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 RNU6-926P-201ENST00000384075 107 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 AL138752.1-201ENST00000452964 351 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 RNU1-29P-201ENST00000606574 126 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 AC024933.1-201ENST00000608472 348 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 MIR6082-201ENST00000613604 109 ntBASIC-0.57□□□□□ -2.5
TOPBP1Q92547 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
TOPBP1Q92547 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.58□□□□□ -2.5
TOPBP1Q92547 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.58□□□□□ -2.5
TOPBP1Q92547 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.58□□□□□ -2.5
TOPBP1Q92547 AC074085.1-201ENST00000413598 418 ntBASIC-0.58□□□□□ -2.5
TOPBP1Q92547 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.58□□□□□ -2.5
TOPBP1Q92547 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.58□□□□□ -2.5
TOPBP1Q92547 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.58□□□□□ -2.5
TOPBP1Q92547 MIR548AD-201ENST00000584780 82 ntBASIC-0.58□□□□□ -2.5
TOPBP1Q92547 MIR3666-201ENST00000607845 111 ntBASIC-0.58□□□□□ -2.5
TOPBP1Q92547 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 RNA5SP300-201ENST00000391197 107 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 RNU6-908P-201ENST00000410160 94 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.59□□□□□ -2.5
TOPBP1Q92547 RNU6-864P-201ENST00000516256 108 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 RNU7-25P-201ENST00000516544 62 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 AL442067.1-201ENST00000613261 223 ntBASIC-0.59□□□□□ -2.5
TOPBP1Q92547 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms