Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 RNU6-158P-201ENST00000517104 100 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 MIR3163-201ENST00000581592 73 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 MIR4305-201ENST00000583252 102 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 AL359075.3-201ENST00000613288 217 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 U6.108-201ENST00000637764 58 ntBASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
TTC9BQ8N6N2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.73-201ENST00000362910 113 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.410-201ENST00000383992 113 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 SNORA67.3-201ENST00000384366 140 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 SNORA8-201ENST00000384574 139 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.531-201ENST00000384589 121 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 RNU6-443P-201ENST00000384780 107 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 RNU6-220P-201ENST00000390919 107 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 FTH1P12-201ENST00000432137 551 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 snoU13.15-201ENST00000459407 104 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 snoU13.26-201ENST00000459452 105 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 AC022137.1-201ENST00000483735 151 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 RNU2-13P-201ENST00000515909 113 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 RNU6-795P-201ENST00000516323 103 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.685-201ENST00000516532 108 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 AC022254.1-201ENST00000567857 235 ntBASIC2.37□□□□□ -2.03
TTC9BQ8N6N2 RNU6-268P-201ENST00000364174 107 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 RNU4-36P-201ENST00000364294 144 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 RNU6-497P-201ENST00000365316 104 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.351-201ENST00000365436 96 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 RNU6-442P-201ENST00000383968 104 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 RNU6-938P-201ENST00000411285 103 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 RNU1-131P-201ENST00000458943 161 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 AC113410.1-201ENST00000505029 247 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 SCARNA23-201ENST00000516060 130 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 RNU1-142P-201ENST00000516682 145 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 MIR5194-201ENST00000582634 120 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 MIR548Z-201ENST00000584743 97 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 AC087685.1-201ENST00000587507 141 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
TTC9BQ8N6N2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.35□□□□□ -2.03
TTC9BQ8N6N2 MIR5739-201ENST00000619803 80 ntBASIC2.35□□□□□ -2.03
TTC9BQ8N6N2 AC091932.4-201ENST00000623386 200 ntBASIC2.35□□□□□ -2.03
TTC9BQ8N6N2 MIR1255B1-201ENST00000636325 63 ntBASIC2.35□□□□□ -2.03
TTC9BQ8N6N2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TTC9BQ8N6N2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TTC9BQ8N6N2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 RNY1P1-201ENST00000364372 112 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 RNU6-644P-201ENST00000391155 98 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 MIR1255A-201ENST00000408338 113 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 AP003484.1-201ENST00000530974 250 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 AC006441.5-201ENST00000612680 209 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 AC012531.4-201ENST00000616509 177 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 AC010297.1-201ENST00000623948 149 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
TTC9BQ8N6N2 Y_RNA.155-201ENST00000363632 101 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 Y_RNA.242-201ENST00000364473 110 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 MIR1912-201ENST00000410389 80 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 RNU2-48P-201ENST00000410694 191 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 SNORD45.4-201ENST00000516629 73 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 RNU6-667P-201ENST00000517186 102 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 AP002004.2-201ENST00000531656 154 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 FAM71BP1-201ENST00000604431 523 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 AL049779.4-201ENST00000604500 156 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 Y_RNA.773-201ENST00000607168 90 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 U7.3-201ENST00000616123 62 ntBASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.33□□□□□ -2.04
TTC9BQ8N6N2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 RNU6-1125P-201ENST00000363601 107 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 SNORA25.6-201ENST00000364121 118 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 Y_RNA.466-201ENST00000384294 113 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 RN7SKP200-201ENST00000410564 320 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 SNRPGP14-201ENST00000435400 219 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 AL163195.1-201ENST00000496941 348 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 AC095038.3-201ENST00000634439 195 ntBASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
TTC9BQ8N6N2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.31□□□□□ -2.04
TTC9BQ8N6N2 RNU6-1099P-201ENST00000363533 107 ntBASIC2.31□□□□□ -2.04
TTC9BQ8N6N2 SNORD114-6-201ENST00000364393 72 ntBASIC2.31□□□□□ -2.04
TTC9BQ8N6N2 RNU11-5P-201ENST00000391216 129 ntBASIC2.31□□□□□ -2.04
TTC9BQ8N6N2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms