Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC092991.1-201ENST00000477176 376 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 RNU6-917P-201ENST00000516294 104 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.674-201ENST00000516362 113 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 Pinc.1-201ENST00000616452 154 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 MIR8063-201ENST00000621930 81 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VPS52Q8N1B4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS52Q8N1B4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 RNU6-578P-201ENST00000390980 103 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 RNU4-43P-201ENST00000410628 137 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 AL138752.1-201ENST00000452964 351 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 SNRPGP8-201ENST00000454064 226 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 AC090049.2-201ENST00000550377 109 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 AC097639.2-201ENST00000603159 172 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 RNU2-4P-201ENST00000606190 192 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 AC108706.1-201ENST00000611053 297 ntBASIC1.57□□□□□ -2.16
VPS52Q8N1B4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS52Q8N1B4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 AC108059.2-201ENST00000434626 151 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 AC015922.2-201ENST00000435593 184 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 AC079140.2-201ENST00000506193 142 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 RNU6-830P-201ENST00000516353 107 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 RNA5SP153-201ENST00000516498 76 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 AL513534.2-201ENST00000603836 250 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 AL365434.2-201ENST00000607979 234 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 AC106754.2-201ENST00000623006 233 ntBASIC1.56□□□□□ -2.16
VPS52Q8N1B4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.75-201ENST00000362927 97 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 SNORD45.3-201ENST00000363836 72 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 RNU6-728P-201ENST00000365375 104 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 RNU4-70P-201ENST00000384579 139 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 MIR802-201ENST00000390235 94 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 MIR1276-201ENST00000408707 83 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 AC109810.1-201ENST00000534066 224 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 AL353770.2-201ENST00000620024 78 ntBASIC1.55□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 RNU6-275P-201ENST00000364910 107 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 SNORA26-201ENST00000391286 122 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 RNU7-120P-201ENST00000459334 63 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 RNU6-561P-201ENST00000516222 102 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 AC072026.1-201ENST00000605023 201 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 AC090425.1-201ENST00000610007 140 ntBASIC1.54□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 SNORD24-201ENST00000383884 75 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 SNORD38C-201ENST00000384381 69 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 MIR15B-201ENST00000385045 98 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 MIR136-201ENST00000385207 82 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 SNORD41-201ENST00000386967 70 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.793-201ENST00000411222 111 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 SNX2P2-201ENST00000424553 323 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 RNU6-197P-201ENST00000516680 100 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 SNORA81.3-201ENST00000517283 198 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 MRPS18CP4-201ENST00000535821 231 ntBASIC1.53□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 MIR518E-201ENST00000385252 88 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 RPS27P16-201ENST00000425758 201 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 SNRPGP13-201ENST00000442212 177 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 RNU6-322P-201ENST00000516010 103 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 MIR6504-201ENST00000613520 61 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 U6.106-201ENST00000636360 105 ntBASIC1.52□□□□□ -2.17
VPS52Q8N1B4 RNU6-888P-201ENST00000363010 101 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 MIR548A2-201ENST00000384956 97 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 MIR516B2-201ENST00000385190 85 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 RNU6-365P-201ENST00000517113 106 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 AP002392.1-201ENST00000537692 208 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 FAM106DP-201ENST00000586416 501 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 AP001485.1-201ENST00000604799 199 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 RNU6-312P-201ENST00000364629 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms