Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Y_RNA.802-201ENST00000614892 130 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 RNU4-10P-201ENST00000364383 140 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.422-201ENST00000384054 114 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 MIR526A2-201ENST00000390198 65 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-1109P-201ENST00000391187 107 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 MIR548O-201ENST00000408583 114 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 MIR1302-7-201ENST00000408841 72 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 POLR2J4-204ENST00000418424 324 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 AL392103.1-201ENST00000447000 198 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 TRBVB-201ENST00000477100 408 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 SCARNA8-201ENST00000515924 131 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 RNU7-25P-201ENST00000516544 62 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 AC109810.1-201ENST00000534066 224 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 AC131055.1-201ENST00000584626 316 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 AC006006.1-201ENST00000603082 144 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.275-201ENST00000364726 110 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-211P-201ENST00000384047 107 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 FABP5P4-201ENST00000437203 171 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 MTCO2P24-201ENST00000515611 426 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 SNORD77.4-201ENST00000516158 81 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 MIR5688-201ENST00000580619 83 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 MIR4791-201ENST00000607666 84 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.44-201ENST00000362676 108 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.512-201ENST00000384518 102 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 SNORA8.3-201ENST00000384679 139 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-847P-201ENST00000411115 108 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.666-201ENST00000516187 112 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 ACA64.5-201ENST00000516207 127 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-635P-201ENST00000516651 102 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 MIR4662B-201ENST00000579498 81 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 AP001282.2-201ENST00000616149 309 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 MIR6516-201ENST00000630554 81 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 MTND1P7-201ENST00000632801 297 ntBASIC0.71□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.24-201ENST00000362508 103 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-654P-201ENST00000364373 107 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.237-201ENST00000364439 102 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 RNU1-36P-201ENST00000365130 165 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 MTATP8P1-201ENST00000467115 207 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 RNU2-13P-201ENST00000515909 113 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 RNA5SP255-201ENST00000516370 107 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.720-201ENST00000517166 92 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 AC036111.3-201ENST00000526389 112 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 AC006504.6-201ENST00000590142 199 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 MIR6788-201ENST00000618842 66 ntBASIC0.7□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-238P-201ENST00000363313 106 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 SNORD113.3-201ENST00000364630 78 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 MIR548J-201ENST00000408833 112 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 AC107297.1-201ENST00000459991 176 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 MIR2115-201ENST00000516657 100 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 MIR548AO-201ENST00000579992 96 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 AC012433.1-201ENST00000588916 398 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-94P-201ENST00000607728 107 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 AC243994.1-201ENST00000618627 109 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
C9orf40Q8IXQ3 SNORD115-28-201ENST00000363931 81 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.229-201ENST00000364347 113 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-740P-201ENST00000364734 105 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.326-201ENST00000365176 113 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-396P-201ENST00000365369 105 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-1160P-201ENST00000384546 104 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 SNORA2B-201ENST00000384583 137 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 Y_RNA.572-201ENST00000384757 98 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 MIR626-201ENST00000385032 94 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNA5SP95-201ENST00000410319 137 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-613P-201ENST00000410412 108 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-994P-201ENST00000410507 111 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 RNU6-126P-201ENST00000516685 103 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 AC007751.1-201ENST00000529260 376 ntBASIC0.68□□□□□ -2.3
C9orf40Q8IXQ3 SNORA63-201ENST00000363450 132 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms