| HOOK3 | Q86VS8 | Y_RNA.355-201 | ENST00000365462 | 98 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.509-201 | ENST00000384506 | 99 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.547-201 | ENST00000384654 | 119 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU1-119P-201 | ENST00000391122 | 165 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR548O-201 | ENST00000408583 | 114 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC244098.3-201 | ENST00000424803 | 96 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MTATP6P23-201 | ENST00000440153 | 476 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AL512605.2-201 | ENST00000592972 | 256 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SAMD9-203 | ENST00000620985 | 6754 nt | APPRIS P1 TSL 2 BASIC | 0.65 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-1272P-201 | ENST00000362776 | 107 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-580P-201 | ENST00000365159 | 107 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-1138P-201 | ENST00000365359 | 106 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.389-201 | ENST00000383924 | 113 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR92A1-201 | ENST00000385233 | 78 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-383P-201 | ENST00000410864 | 94 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR4714-201 | ENST00000580728 | 77 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | ZBTB41-201 | ENST00000367405 | 8478 nt | APPRIS P1 TSL 1 (best) BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MT-CO2-201 | ENST00000361739 | 684 nt | APPRIS P1 BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.14-201 | ENST00000362415 | 103 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.105-201 | ENST00000363182 | 111 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.380-201 | ENST00000365663 | 111 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-121P-201 | ENST00000410525 | 99 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC107297.1-201 | ENST00000459991 | 176 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR5692C2-201 | ENST00000577959 | 77 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC011195.1-201 | ENST00000578177 | 177 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AP000753.3-201 | ENST00000604083 | 169 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR367-201 | ENST00000362299 | 68 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD45.3-201 | ENST00000363836 | 72 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | CPEB3_ribozyme.1-201 | ENST00000408115 | 78 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | snoU13.16-201 | ENST00000459350 | 104 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORA40.15-201 | ENST00000516884 | 107 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU2-31P-201 | ENST00000516954 | 155 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC004812.1-201 | ENST00000540773 | 146 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR4264-201 | ENST00000583520 | 66 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | NPPA-AS1_2.1-201 | ENST00000618496 | 149 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR6515-201 | ENST00000619843 | 57 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | ANGPTL3-201 | ENST00000371129 | 2805 nt | APPRIS P1 TSL 1 (best) BASIC | 0.62 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-326P-201 | ENST00000365480 | 107 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-474P-201 | ENST00000384243 | 107 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-125P-201 | ENST00000384505 | 107 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORA53-201 | ENST00000391141 | 249 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.631-201 | ENST00000459607 | 101 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AL117351.2-201 | ENST00000513571 | 157 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-988P-201 | ENST00000519081 | 107 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AP003484.1-201 | ENST00000530974 | 250 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR4724-201 | ENST00000579485 | 89 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC037487.3-201 | ENST00000606668 | 112 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AL160413.1-201 | ENST00000622780 | 310 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORA25.1-201 | ENST00000362326 | 128 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-34-201 | ENST00000362441 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-369P-201 | ENST00000362515 | 102 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-12-201 | ENST00000362583 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-29-201 | ENST00000362834 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-9-201 | ENST00000362912 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-21-201 | ENST00000362963 | 81 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-14-201 | ENST00000363090 | 81 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-13-201 | ENST00000363358 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-41-201 | ENST00000363608 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-11-201 | ENST00000363616 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-5-201 | ENST00000363633 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-39-201 | ENST00000363694 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-4-201 | ENST00000363810 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-16-201 | ENST00000363887 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-6-201 | ENST00000363942 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-42-201 | ENST00000364273 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-15-201 | ENST00000364809 | 81 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-1-201 | ENST00000364961 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-26-201 | ENST00000365067 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-10-201 | ENST00000365073 | 81 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-43-201 | ENST00000365503 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-36-201 | ENST00000365629 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-514P-201 | ENST00000384208 | 107 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU6-205P-201 | ENST00000390858 | 107 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | DIP2A-IT1-201 | ENST00000442434 | 428 nt | TSL 2 BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC091959.1-201 | ENST00000495857 | 238 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNA5SP121-201 | ENST00000516537 | 101 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | MIR4662B-201 | ENST00000579498 | 81 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AP001094.1-201 | ENST00000579805 | 193 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | SNORD115-40-201 | ENST00000606510 | 82 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC135050.6-201 | ENST00000610813 | 528 nt | TSL 3 BASIC | 0.6 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNA5SP347-201 | ENST00000362445 | 119 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.241-201 | ENST00000364470 | 117 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.276-201 | ENST00000364732 | 109 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | BTF3P11-201 | ENST00000426582 | 477 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC087499.4-201 | ENST00000448505 | 178 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | RNU4-54P-201 | ENST00000516428 | 129 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AL355297.3-201 | ENST00000604082 | 446 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | AC022709.1-201 | ENST00000615967 | 87 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| HOOK3 | Q86VS8 | snoU2_19.2-201 | ENST00000363024 | 80 nt | BASIC | 0.58 | □□□□□ -2.32 | | |
| HOOK3 | Q86VS8 | RNU6-770P-201 | ENST00000363929 | 105 nt | BASIC | 0.58 | □□□□□ -2.32 | | |
| HOOK3 | Q86VS8 | Y_RNA.293-201 | ENST00000364908 | 93 nt | BASIC | 0.58 | □□□□□ -2.32 | | |
| HOOK3 | Q86VS8 | Y_RNA.541-201 | ENST00000384640 | 113 nt | BASIC | 0.58 | □□□□□ -2.32 | | |
| HOOK3 | Q86VS8 | RNA5SP222-201 | ENST00000411039 | 105 nt | BASIC | 0.58 | □□□□□ -2.32 | | |
| HOOK3 | Q86VS8 | AC018659.1-201 | ENST00000551083 | 169 nt | BASIC | 0.58 | □□□□□ -2.32 | | |