Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SNORD24-201ENST00000383884 75 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 Y_RNA.580-201ENST00000391004 95 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 RNU4-62P-201ENST00000410125 130 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 AP1B1P2-201ENST00000416196 106 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 RNU7-121P-201ENST00000516604 62 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.04□□□□□ -2.08
RNF180Q86T96 AC015688.6-201ENST00000577737 104 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 MIR3144-201ENST00000579460 79 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 AC104465.1-201ENST00000611365 139 ntBASIC2.04□□□□□ -2.08
RNF180Q86T96 RNU6-1065P-201ENST00000384513 106 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 AC006461.1-201ENST00000412637 326 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 AC079140.2-201ENST00000506193 142 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 TRMT112P2-201ENST00000512910 132 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 SNORD116-25-201ENST00000516517 92 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF180Q86T96 MIR502-201ENST00000606349 86 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 AC106754.2-201ENST00000623006 233 ntBASIC2.03□□□□□ -2.08
RNF180Q86T96 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.03□□□□□ -2.08
RNF180Q86T96 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
RNF180Q86T96 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 Y_RNA.337-201ENST00000365312 102 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 RNU6-804P-201ENST00000384286 107 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 MIR499A-201ENST00000384903 122 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RNF180Q86T96 MIR934-201ENST00000401241 83 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 AL451046.2-201ENST00000403074 277 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 MIR548O-201ENST00000408583 114 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 RNU6-255P-201ENST00000516957 105 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 MIR378D2-201ENST00000580636 98 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 AC015726.2-201ENST00000620112 122 ntBASIC2.02□□□□□ -2.09
RNF180Q86T96 Y_RNA.91-201ENST00000363042 107 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 SNX2P2-201ENST00000424553 323 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 AC005908.1-201ENST00000468701 347 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 AC090142.3-201ENST00000519012 385 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 AC090049.2-201ENST00000550377 109 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 MIR4422-201ENST00000581938 83 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 FAM106DP-201ENST00000586416 501 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 MIR8070-201ENST00000616510 88 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 AC021753.1-201ENST00000635724 168 ntBASIC2.01□□□□□ -2.09
RNF180Q86T96 Y_RNA.521-201ENST00000384560 114 ntBASIC2□□□□□ -2.09
RNF180Q86T96 MIR489-201ENST00000384923 84 ntBASIC2□□□□□ -2.09
RNF180Q86T96 MIR516B2-201ENST00000385190 85 ntBASIC2□□□□□ -2.09
RNF180Q86T96 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
RNF180Q86T96 SNRPGP14-201ENST00000435400 219 ntBASIC2□□□□□ -2.09
RNF180Q86T96 RNU6-693P-201ENST00000516134 107 ntBASIC2□□□□□ -2.09
RNF180Q86T96 Y_RNA.666-201ENST00000516187 112 ntBASIC2□□□□□ -2.09
RNF180Q86T96 MIR3937-201ENST00000580135 106 ntBASIC2□□□□□ -2.09
RNF180Q86T96 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RNF180Q86T96 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RNF180Q86T96 Y_RNA.66-201ENST00000362862 102 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 RNU6-888P-201ENST00000363010 101 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 Y_RNA.170-201ENST00000363746 110 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 RNU6-449P-201ENST00000383914 107 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 Y_RNA.398-201ENST00000383952 99 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 RNU6-830P-201ENST00000516353 107 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 MIR4303-201ENST00000581299 66 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 AL513534.2-201ENST00000603836 250 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 AL357312.1-201ENST00000603879 298 ntBASIC1.99□□□□□ -2.09
RNF180Q86T96 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF180Q86T96 Y_RNA.8-201ENST00000362353 102 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 RNU6-978P-201ENST00000364371 103 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 SNORA25.9-201ENST00000365087 128 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 SNORA1.2-201ENST00000365189 134 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 MIR653-201ENST00000385279 96 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 AC092991.1-201ENST00000477176 376 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF180Q86T96 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF180Q86T96 DNAJC19P9-201ENST00000555084 351 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF180Q86T96 DNAJC19P2-201ENST00000593340 302 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 AL512598.1-201ENST00000610158 273 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 MTND1P7-201ENST00000632801 297 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
RNF180Q86T96 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF180Q86T96 SNORD115-28-201ENST00000363931 81 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 SNORD1A-201ENST00000364968 72 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 RNU6-1130P-201ENST00000365434 107 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 RNU6-597P-201ENST00000365620 102 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 Y_RNA.393-201ENST00000383936 102 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 SNORD116-18-201ENST00000383961 92 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 RNU6-1067P-201ENST00000384752 107 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 MIR526A1-201ENST00000384897 85 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF180Q86T96 RNU7-25P-201ENST00000516544 62 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 RNU6-1270P-201ENST00000517128 108 ntBASIC1.97□□□□□ -2.09
RNF180Q86T96 SNORA25.7-201ENST00000364375 127 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 SNORD61-201ENST00000384252 73 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 Y_RNA.542-201ENST00000384641 111 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 MIR518E-201ENST00000385252 88 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 AC087499.4-201ENST00000448505 178 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 RNU7-200P-201ENST00000516105 62 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 RNU6-917P-201ENST00000516294 104 ntBASIC1.96□□□□□ -2.1
RNF180Q86T96 MTND5P41-201ENST00000517498 206 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms