Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AL355297.2-201ENST00000604792 129 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 AL442128.1-201ENST00000615151 90 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 AL442644.1-201ENST00000454390 3105 ntBASIC2.34□□□□□ -2.04
LIMS2Q7Z4I7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
LIMS2Q7Z4I7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 SNORD14E-201ENST00000364009 85 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 SNORA8-201ENST00000384574 139 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 MIR548D2-201ENST00000384955 97 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 MIR759-201ENST00000390224 91 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-220P-201ENST00000390919 107 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 RNU7-123P-201ENST00000515911 60 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 SNORD45.4-201ENST00000516629 73 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 MIR3683-201ENST00000580847 82 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 MIR4298-201ENST00000584380 73 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 AC002984.1-201ENST00000591692 448 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 AC062037.1-201ENST00000605302 128 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
LIMS2Q7Z4I7 MIR302B-201ENST00000362188 73 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 SNORD68-201ENST00000363214 84 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 RNY1P7-201ENST00000384743 110 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 AC087499.4-201ENST00000448505 178 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 RNU7-164P-201ENST00000459221 62 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 MIR4648-201ENST00000580107 72 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 MIR5002-201ENST00000584713 97 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 MIR2052-201ENST00000636055 55 ntBASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
LIMS2Q7Z4I7 AL596211.1-201ENST00000569873 2277 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 RNU1-133P-201ENST00000364867 167 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.466-201ENST00000384294 113 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 RNA5SP323-201ENST00000391094 133 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 U8.17-201ENST00000391292 132 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 RNU2-35P-201ENST00000516446 142 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 AC022523.2-201ENST00000561045 150 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 MIR4305-201ENST00000583252 102 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 AL162726.3-218ENST00000636401 95 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 ZNF355P-201ENST00000427301 3216 ntBASIC2.31□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.93-201ENST00000363066 109 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 SNORA38-201ENST00000363946 132 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 SNORA64-201ENST00000384674 134 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-1275P-201ENST00000391087 107 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 RNA5SP482-201ENST00000391269 118 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 MIR1262-201ENST00000408276 93 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 AP003484.1-201ENST00000530974 250 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 MIR3163-201ENST00000581592 73 ntBASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-862P-201ENST00000362804 105 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 U8.2-201ENST00000363156 134 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.220-201ENST00000364244 109 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.351-201ENST00000365436 96 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-443P-201ENST00000384780 107 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 AL606517.2-201ENST00000442855 241 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU7-80P-201ENST00000459562 61 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU7-28P-201ENST00000516759 62 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 RNU7-70P-201ENST00000516941 66 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 MIR4658-201ENST00000584344 65 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 MALAT1.1-201ENST00000618249 95 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 AC091932.4-201ENST00000623386 200 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 Z82195.2-201ENST00000612348 18351 ntBASIC2.29□□□□□ -2.04
LIMS2Q7Z4I7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 RNU1-91P-201ENST00000364746 163 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 Y_RNA.342-201ENST00000365352 113 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 RNU1-52P-201ENST00000384190 164 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 RNU6-160P-201ENST00000384591 107 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 AL627390.1-201ENST00000396055 340 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 RPS3AP1-201ENST00000413190 320 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 SNORA31.4-201ENST00000516049 129 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 AP003327.1-201ENST00000529684 127 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 SNORD115-40-201ENST00000606510 82 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 MIR6132-201ENST00000622083 109 ntBASIC2.28□□□□□ -2.04
LIMS2Q7Z4I7 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms