Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 RPS26P48-201ENST00000491713 339 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 RNU4-57P-201ENST00000515980 135 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 SCARNA15.1-201ENST00000516384 125 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 AC091895.1-201ENST00000624494 256 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 AC008133.2-201ENST00000624540 351 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 MIR337-201ENST00000362281 93 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 SNORD28B-201ENST00000390993 75 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 RNU7-21P-201ENST00000459430 62 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 RNU6-1045P-201ENST00000516321 107 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
NUP54Q7Z3B4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
NUP54Q7Z3B4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.25
NUP54Q7Z3B4 MIR103A2-201ENST00000362154 78 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.133-201ENST00000363428 110 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.162-201ENST00000363683 102 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 RNU6-53P-201ENST00000365367 106 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.556-201ENST00000384677 113 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 SNORA75.2-201ENST00000391138 150 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 SNORA75.3-201ENST00000391231 150 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 MIR548O-201ENST00000408583 114 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 RNU6-651P-201ENST00000411040 105 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 MTCYBP9-201ENST00000431021 303 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 MIR4251-201ENST00000635819 61 ntBASIC1.02□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.288-201ENST00000364854 92 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 RNY3P5-201ENST00000384127 102 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 RNU7-90P-201ENST00000459216 62 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 RNU7-25P-201ENST00000516544 62 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 RNU7-181P-201ENST00000517234 74 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 AC012433.1-201ENST00000588916 398 ntBASIC1.01□□□□□ -2.25
NUP54Q7Z3B4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.572-201ENST00000384757 98 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 MIR1302-3-201ENST00000408128 138 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 MIR1185-1-201ENST00000408598 86 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 RNU2-55P-201ENST00000411146 174 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 SNORD127-201ENST00000458892 86 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 SCARNA8-201ENST00000515924 131 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.666-201ENST00000516187 112 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 RNU11-2P-201ENST00000516898 142 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 SEPT14P17-201ENST00000617978 177 ntBASIC1□□□□□ -2.25
NUP54Q7Z3B4 AC008163.1-202ENST00000636004 2889 ntBASIC0.99□□□□□ -2.25
NUP54Q7Z3B4 SNORA25.3-201ENST00000363205 127 ntBASIC0.99□□□□□ -2.25
NUP54Q7Z3B4 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
NUP54Q7Z3B4 MIR548H3-201ENST00000408771 118 ntBASIC0.99□□□□□ -2.25
NUP54Q7Z3B4 AL365265.1-201ENST00000621045 234 ntBASIC0.99□□□□□ -2.25
NUP54Q7Z3B4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 SNORD24-201ENST00000383884 75 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 SNORA51.10-201ENST00000384418 136 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 SNORA26-201ENST00000391286 122 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 RNU2-38P-201ENST00000410856 79 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 RNU6-847P-201ENST00000411115 108 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 AL392103.1-201ENST00000447000 198 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 RNU2-13P-201ENST00000515909 113 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 RNU6-365P-201ENST00000517113 106 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 AC109810.1-201ENST00000534066 224 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.98□□□□□ -2.25
NUP54Q7Z3B4 SNORD115-28-201ENST00000363931 81 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.277-201ENST00000364754 102 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 MIR568-201ENST00000385036 95 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 RNU2-64P-201ENST00000411315 191 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 AC087499.4-201ENST00000448505 178 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 PDCD5P2-201ENST00000507570 312 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 AC007751.1-201ENST00000529260 376 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 MIR4643-201ENST00000577473 78 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 MIR4781-201ENST00000585250 76 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 MIR4791-201ENST00000607666 84 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 AL442067.1-201ENST00000613261 223 ntBASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
NUP54Q7Z3B4 Y_RNA.54-201ENST00000362766 105 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNU6-653P-201ENST00000363074 106 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms