Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 Y_RNA.441-201ENST00000384123 112 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 Y_RNA.555-201ENST00000384673 110 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 MIR504-201ENST00000385065 83 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 MT-TR-201ENST00000387439 65 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.38□□□□□ -2.19
SHFQ7M4L6 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 SNORA25.15-201ENST00000516487 89 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 RNU7-181P-201ENST00000517234 74 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 MIR6845-201ENST00000613182 61 ntBASIC1.38□□□□□ -2.19
SHFQ7M4L6 SNORD115-28-201ENST00000363931 81 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 SNORD28B-201ENST00000390993 75 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 U8.17-201ENST00000391292 132 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 AL627390.1-201ENST00000396055 340 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 RNU6-938P-201ENST00000411285 103 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 AF228730.3-201ENST00000436691 102 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 AC107027.2-201ENST00000512197 115 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 RNU1-41P-201ENST00000516161 162 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 RNU1-48P-201ENST00000516400 162 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 SNORD116-25-201ENST00000516517 92 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 RNU6-295P-201ENST00000516901 104 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 MIR4285-201ENST00000581001 85 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.37□□□□□ -2.19
SHFQ7M4L6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SHFQ7M4L6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SHFQ7M4L6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SHFQ7M4L6 RNU6-1135P-201ENST00000411083 103 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.36□□□□□ -2.19
SHFQ7M4L6 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 MIR3664-201ENST00000579074 99 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 MIR4513-201ENST00000581077 86 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 MIR548AR-201ENST00000582191 57 ntBASIC1.36□□□□□ -2.19
SHFQ7M4L6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
SHFQ7M4L6 Y_RNA.272-201ENST00000364696 102 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 Y_RNA.357-201ENST00000365487 109 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 RNU6-768P-201ENST00000384683 107 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 RNU6-239P-201ENST00000390990 99 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 SNORD77.3-201ENST00000391113 65 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.35□□□□□ -2.19
SHFQ7M4L6 SNORD111.1-201ENST00000516421 86 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 MIR3129-201ENST00000581095 76 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 AL365205.2-201ENST00000594586 68 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SHFQ7M4L6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.35□□□□□ -2.19
SHFQ7M4L6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SHFQ7M4L6 Y_RNA.521-201ENST00000384560 114 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 SNORA26.9-201ENST00000391322 122 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 MIR548I3-201ENST00000408378 149 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 MIR548I1-201ENST00000408810 149 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 AC087499.4-201ENST00000448505 178 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 RPL30P7-201ENST00000479312 323 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 RNU7-121P-201ENST00000516604 62 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 SNORD36C-201ENST00000516733 66 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 MIR4764-201ENST00000580680 88 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 AL357312.1-201ENST00000603879 298 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 AC134878.1-201ENST00000619901 243 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 MIR376A2-201ENST00000636782 80 ntBASIC1.34□□□□□ -2.19
SHFQ7M4L6 Y_RNA.180-201ENST00000363867 113 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 Y_RNA.337-201ENST00000365312 102 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 Y_RNA.542-201ENST00000384641 111 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SHFQ7M4L6 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 RNU6-394P-201ENST00000410735 107 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 RNU7-43P-201ENST00000516554 64 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 AC104465.1-201ENST00000611365 139 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.33□□□□□ -2.2
SHFQ7M4L6 MIR3658-201ENST00000636291 56 ntBASIC1.33□□□□□ -2.2
SHFQ7M4L6 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 RNA5SP126-201ENST00000365092 109 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 RNU6-597P-201ENST00000365620 102 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 MIR570-201ENST00000384917 97 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 MIR520C-201ENST00000385005 87 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 SNORA59A-201ENST00000459326 152 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 RNU7-41P-201ENST00000515917 61 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 AP003484.1-201ENST00000530974 250 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
SHFQ7M4L6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SHFQ7M4L6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 SNORA1.2-201ENST00000365189 134 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 RNU6-1292P-201ENST00000383856 107 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms