| BBS12 | Q6ZW61 | TTC28-AS1_2.1-201 | ENST00000611117 | 157 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | 7SK.10-201 | ENST00000621414 | 298 nt | BASIC | 1.28 | □□□□□ -2.2 | | |
| BBS12 | Q6ZW61 | MIR103A2-201 | ENST00000362154 | 78 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.65-201 | ENST00000362846 | 100 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.432-201 | ENST00000384087 | 111 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6ATAC15P-201 | ENST00000408279 | 121 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORA79-201 | ENST00000408376 | 140 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC131956.1-201 | ENST00000506420 | 258 nt | TSL 2 BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL162730.1-201 | ENST00000605734 | 292 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL512598.1-201 | ENST00000610158 | 273 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR4251-201 | ENST00000635819 | 61 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | ABCA5-201 | ENST00000392676 | 8220 nt | APPRIS P1 TSL 1 (best) BASIC | 1.27 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.140-201 | ENST00000363474 | 103 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.193-201 | ENST00000363979 | 102 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.547-201 | ENST00000384654 | 119 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORD12-201 | ENST00000391002 | 90 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-847P-201 | ENST00000411115 | 108 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | LINC01866-201 | ENST00000421181 | 201 nt | TSL 3 BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL121580.1-201 | ENST00000449941 | 219 nt | TSL 3 BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-693P-201 | ENST00000516134 | 107 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-504P-201 | ENST00000516568 | 104 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR4643-201 | ENST00000577473 | 78 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNA5SP264-201 | ENST00000363115 | 107 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.452-201 | ENST00000384202 | 108 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORA51.10-201 | ENST00000384418 | 136 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC063976.4-201 | ENST00000421971 | 163 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL360175.1-201 | ENST00000426547 | 285 nt | TSL 5 BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU7-95P-201 | ENST00000459222 | 64 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORD116-28-201 | ENST00000516123 | 91 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.673-201 | ENST00000516306 | 88 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR4503-201 | ENST00000582187 | 83 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR3149-201 | ENST00000584629 | 83 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | CEP57L1-213 | ENST00000520883 | 2055 nt | TSL 5 BASIC | 1.25 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORA25.3-201 | ENST00000363205 | 127 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORD115-28-201 | ENST00000363931 | 81 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.241-201 | ENST00000364470 | 117 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORA20.1-201 | ENST00000364790 | 130 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-728P-201 | ENST00000365375 | 104 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6ATAC8P-201 | ENST00000408460 | 126 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU4-57P-201 | ENST00000515980 | 135 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORD79.1-201 | ENST00000516069 | 84 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC109810.1-201 | ENST00000534066 | 224 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC027335.2-201 | ENST00000624030 | 375 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.20-201 | ENST00000362479 | 113 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.76-201 | ENST00000362931 | 109 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-653P-201 | ENST00000363074 | 106 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-103P-201 | ENST00000363686 | 107 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | snoU2_19.4-201 | ENST00000364329 | 80 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.330-201 | ENST00000365230 | 109 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORD24-201 | ENST00000383884 | 75 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-463P-201 | ENST00000384340 | 107 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-381P-201 | ENST00000391259 | 108 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC023051.1-201 | ENST00000414098 | 876 nt | TSL 5 BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MRPL35P3-201 | ENST00000421557 | 364 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC087499.4-201 | ENST00000448505 | 178 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RN7SKP179-201 | ENST00000516126 | 217 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNA5SP404-201 | ENST00000517118 | 132 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | PRELID3BP2-201 | ENST00000605362 | 201 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AP003174.1-201 | ENST00000306533 | 376 nt | TSL 2 BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.144-201 | ENST00000363521 | 113 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORA7.1-201 | ENST00000363750 | 139 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | Y_RNA.308-201 | ENST00000365043 | 101 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL353614.1-201 | ENST00000445631 | 206 nt | TSL 5 BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU7-90P-201 | ENST00000459216 | 62 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNA5SP153-201 | ENST00000516498 | 76 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | RNU6-1270P-201 | ENST00000517128 | 108 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC009093.3-203 | ENST00000565800 | 121 nt | TSL 2 BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR4498-201 | ENST00000577599 | 66 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR3128-201 | ENST00000581957 | 66 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | MIR4791-201 | ENST00000607666 | 84 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AC008163.1-202 | ENST00000636004 | 2889 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| BBS12 | Q6ZW61 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | Y_RNA.269-201 | ENST00000364685 | 89 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | RNU4-71P-201 | ENST00000516258 | 113 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | AC004817.2-201 | ENST00000561794 | 651 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | snoU13.31-201 | ENST00000607291 | 104 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | AC134878.1-201 | ENST00000619901 | 243 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | C9orf84-204 | ENST00000394777 | 4955 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.2 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | Y_RNA.634-201 | ENST00000364811 | 113 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | RNU7-67P-201 | ENST00000459003 | 62 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | RNU11-2P-201 | ENST00000516898 | 142 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | PNRC2-204 | ENST00000579103 | 171 nt | TSL 2 BASIC | 1.2 | □□□□□ -2.22 | | |
| BBS12 | Q6ZW61 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 1.2 | □□□□□ -2.22 | | |