Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-334P-201ENST00000517072 102 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 AC134698.4-201ENST00000523451 826 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 MTND5P40-201ENST00000559945 246 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 HULC.1-201ENST00000612720 240 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 AC006927.2-201ENST00000639256 389 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 AC005771.1-201ENST00000585581 349 ntBASIC-0.9□□□□□ -2.55
CSPG4Q6UVK1 SNORA72.6-201ENST00000384520 129 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 RNU6-903P-201ENST00000391270 109 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 MRPL42P2-201ENST00000403169 426 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 MTCYBP36-201ENST00000404146 440 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 RNU2-9P-201ENST00000410194 145 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 AL442663.2-201ENST00000554385 511 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 CPDP1-201ENST00000579660 283 ntBASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.91□□□□□ -2.56
CSPG4Q6UVK1 RNY1P12-201ENST00000364251 105 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RNU6-597P-201ENST00000365620 102 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 SNORD72-201ENST00000390994 80 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 MIR450B-201ENST00000401182 78 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 MIR548I3-201ENST00000408378 149 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RNU6-998P-201ENST00000515894 101 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 MIR5704-201ENST00000584029 77 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AC011373.1-201ENST00000607270 237 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 SEPT14P19-203ENST00000633205 211 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 SNORD115-32-201ENST00000364079 82 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RNU6-108P-201ENST00000365558 107 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AL500527.2-201ENST00000454105 95 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RPS29P24-201ENST00000486345 171 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RNU7-149P-201ENST00000516739 59 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RNU7-188P-201ENST00000517063 64 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AL137161.1-201ENST00000532231 390 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AL353803.5-201ENST00000599815 141 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AL445584.3-201ENST00000617173 78 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AC127459.3-201ENST00000624328 466 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 AC099654.13-201ENST00000639774 207 ntBASIC-0.92□□□□□ -2.56
CSPG4Q6UVK1 RNU4-58P-201ENST00000363192 141 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU4-80P-201ENST00000363200 141 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU1-141P-201ENST00000364623 158 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 SNORA72.3-201ENST00000365074 132 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU6-224P-201ENST00000384055 107 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU6-281P-201ENST00000384212 103 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU6-517P-201ENST00000384362 110 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU4-70P-201ENST00000384579 139 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 AC016907.1-201ENST00000419483 435 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 USMG5P1-201ENST00000425964 177 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 MTCO1P29-201ENST00000496868 288 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 MIR4770-201ENST00000579149 58 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 U6.109-201ENST00000636749 87 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 MIR539-201ENST00000365690 78 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 MTCO2P16-201ENST00000436962 677 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNA5SP272-201ENST00000516095 111 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 U2.17-201ENST00000611454 95 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 MIR8068-201ENST00000618032 68 ntBASIC-0.93□□□□□ -2.56
CSPG4Q6UVK1 RNU6-433P-201ENST00000363216 104 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 MIR521-1-201ENST00000384902 87 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 SNORA40.5-201ENST00000391061 128 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 RNA5SP237-201ENST00000410414 113 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 RNU6-938P-201ENST00000411285 103 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 SCARNA18B-201ENST00000458806 135 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 MTND4LP18-201ENST00000526864 291 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC092807.2-201ENST00000609367 243 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC109347.2-201ENST00000610220 349 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC103705.1-201ENST00000619013 241 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC009878.1-201ENST00000621819 340 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 AC007494.3-201ENST00000624660 743 ntBASIC-0.94□□□□□ -2.56
CSPG4Q6UVK1 RNU6-268P-201ENST00000364174 107 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 MTND3P21-201ENST00000433774 331 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 SNORA25.16-201ENST00000516741 121 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 MIR548H5-201ENST00000580314 60 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 YWHAEP3-201ENST00000582767 121 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 AC124312.5-201ENST00000604451 268 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 AL121895.2-201ENST00000619558 447 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 AC022140.2-201ENST00000623500 188 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 MIR626-201ENST00000385032 94 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 MTND2P3-201ENST00000452458 470 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 RNU7-96P-201ENST00000459535 64 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 SNORA19.2-201ENST00000516013 114 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 RNU6-189P-201ENST00000516120 101 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 RNU6-693P-201ENST00000516134 107 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms