Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 MTND3P21-201ENST00000433774 331 ntBASIC-1.2□□□□□ -2.6
CCDC171Q6TFL3 AL445193.1-201ENST00000441183 141 ntBASIC-1.2□□□□□ -2.6
CCDC171Q6TFL3 RPL30P15-201ENST00000457129 321 ntBASIC-1.2□□□□□ -2.6
CCDC171Q6TFL3 RNU7-116P-201ENST00000516940 62 ntBASIC-1.2□□□□□ -2.6
CCDC171Q6TFL3 MIR5188-201ENST00000583467 113 ntBASIC-1.2□□□□□ -2.6
CCDC171Q6TFL3 RNU6-254P-201ENST00000363377 107 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 SNORD41.1-201ENST00000391000 69 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 MTND2P31-201ENST00000512602 616 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 AC021146.6-201ENST00000514659 117 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 RNY1P9-201ENST00000532431 109 ntBASIC-1.21□□□□□ -2.6
CCDC171Q6TFL3 RNU6-865P-201ENST00000364772 107 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 SNORA27-201ENST00000384323 126 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 RNU6-455P-201ENST00000384681 107 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 MIR513B-201ENST00000385136 84 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 RNU6-248P-201ENST00000410720 107 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 AL593851.1-201ENST00000426171 157 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 USP9YP30-201ENST00000430729 455 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 RNU7-104P-201ENST00000459398 79 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 RNU6-408P-201ENST00000515910 100 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 AC055872.1-201ENST00000570978 278 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 AC245884.10-201ENST00000597355 337 ntBASIC-1.22□□□□□ -2.61
CCDC171Q6TFL3 RNU6-318P-201ENST00000384283 103 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 MIR122-201ENST00000385044 85 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 MIR190B-201ENST00000401119 79 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 MIR548O-201ENST00000408583 114 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 MIR1278-201ENST00000408753 81 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 AL009048.1-201ENST00000450437 298 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 RPS29P24-201ENST00000486345 171 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 RNU6-436P-201ENST00000516171 114 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 AC018638.8-201ENST00000588755 281 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 AL356055.1-201ENST00000602528 446 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 AC124303.1-201ENST00000605703 360 ntBASIC-1.23□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 RNU4-20P-201ENST00000365601 151 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 SNORD57-201ENST00000448188 72 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 AC244505.6-201ENST00000452829 130 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 RNU7-87P-201ENST00000459343 62 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 AC010655.3-201ENST00000478818 450 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 AC083904.1-201ENST00000487828 231 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 MIR2681-201ENST00000581814 105 ntBASIC-1.24□□□□□ -2.61
CCDC171Q6TFL3 SNORA72.3-201ENST00000365074 132 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 SNORD77.3-201ENST00000391113 65 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 RNU6-938P-201ENST00000411285 103 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 RNA5SP484-201ENST00000458857 111 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 RNU6-881P-201ENST00000516813 102 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 RNU7-188P-201ENST00000517063 64 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 AC141846.1-201ENST00000568348 142 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 MIR3913-1-201ENST00000577744 102 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 MIR4423-201ENST00000580922 80 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 AP003357.1-201ENST00000604497 148 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.25□□□□□ -2.61
CCDC171Q6TFL3 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 RNU6-702P-201ENST00000364982 107 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 RNU6-597P-201ENST00000365620 102 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 SNORA27.4-201ENST00000516650 95 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 AC073648.5-201ENST00000603502 305 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 AC004223.4-201ENST00000612426 332 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 MIR6717-201ENST00000622747 73 ntBASIC-1.26□□□□□ -2.61
CCDC171Q6TFL3 RNU6-509P-201ENST00000363519 107 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 RNA5SP403-201ENST00000363598 108 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 SNORD115-28-201ENST00000363931 81 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 MIR548I3-201ENST00000408378 149 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 RNU4-55P-201ENST00000410731 137 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 MTND3P16-201ENST00000452205 344 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 MTND3P7-201ENST00000474435 343 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 AC124312.5-201ENST00000604451 268 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 AC011373.1-201ENST00000607270 237 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 AC018645.2-201ENST00000609151 472 ntBASIC-1.27□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 SNORD114-25-201ENST00000363742 72 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 RNU6-961P-201ENST00000363893 105 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 RNU4-50P-201ENST00000364361 141 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 RNU6-596P-201ENST00000365395 98 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 SNORD12B-201ENST00000410433 91 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 RNU6-531P-201ENST00000516694 104 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 MIR4280-201ENST00000582178 76 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 AC022960.3-201ENST00000619794 441 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 AC007494.3-201ENST00000624660 743 ntBASIC-1.28□□□□□ -2.61
CCDC171Q6TFL3 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms