Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-573P-201ENST00000383938 106 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-442P-201ENST00000383968 104 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RNY1P6-201ENST00000384193 109 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 SNORA8-201ENST00000384574 139 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 MIR548D2-201ENST00000384955 97 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-592P-201ENST00000411333 103 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RN7SL297P-201ENST00000483161 293 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-548P-201ENST00000517083 115 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 HSPE1P19-201ENST00000603327 295 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 MALAT1.1-201ENST00000618249 95 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 MIR1245B-201ENST00000636115 69 ntBASIC2.51□□□□□ -2.01
CNKSR3Q6P9H4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 RNA5SP99-201ENST00000364020 114 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 U8.5-201ENST00000364528 136 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 MIR802-201ENST00000390235 94 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 U8.17-201ENST00000391292 132 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 AL445646.1-201ENST00000431784 216 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 RNU2-35P-201ENST00000516446 142 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 AP003327.1-201ENST00000529684 127 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
CNKSR3Q6P9H4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 SNORD14E-201ENST00000364009 85 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 RNU1-133P-201ENST00000364867 167 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 MIR759-201ENST00000390224 91 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 RNA5SP323-201ENST00000391094 133 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 AC099677.2-201ENST00000436385 175 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 SNORD115-40-201ENST00000606510 82 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.49□□□□□ -2.01
CNKSR3Q6P9H4 MIR302B-201ENST00000362188 73 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 Y_RNA.342-201ENST00000365352 113 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 SNORA64-201ENST00000384674 134 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 RPS3AP1-201ENST00000413190 320 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 AL606517.2-201ENST00000442855 241 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 RPL23AP42-201ENST00000471152 471 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 RN7SKP12-201ENST00000516275 143 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 SNORD45.4-201ENST00000516629 73 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 RNA5SP137-201ENST00000516833 135 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 MIR4305-201ENST00000583252 102 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 AC022202.1-201ENST00000613515 211 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 AL353997.5-201ENST00000618886 171 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 AL162726.3-218ENST00000636401 95 ntBASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CNKSR3Q6P9H4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 Y_RNA.351-201ENST00000365436 96 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 RNU1-131P-201ENST00000458943 161 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 RNA5SP57-201ENST00000459463 123 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 RNU7-94P-201ENST00000459576 63 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 SNORA31.4-201ENST00000516049 129 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 RNU7-70P-201ENST00000516941 66 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 AP003484.1-201ENST00000530974 250 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 AC091932.4-201ENST00000623386 200 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CNKSR3Q6P9H4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-862P-201ENST00000362804 105 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 SNORD115-3-201ENST00000363100 82 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR450A2-201ENST00000385022 100 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR221-201ENST00000385135 110 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR29C-201ENST00000385231 88 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 HMGN2P23-201ENST00000456759 269 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 AC107297.1-201ENST00000459991 176 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 AC024995.1-201ENST00000523014 93 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR3163-201ENST00000581592 73 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 MIR2052-201ENST00000636055 55 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 ICE2P2-201ENST00000483823 2787 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 AC131280.1-202ENST00000624067 4211 ntBASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CNKSR3Q6P9H4 SNORA63D-201ENST00000364359 132 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms