Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 Y_RNA.639-201ENST00000458981 102 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 RNU6-1007P-201ENST00000516586 107 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 Y_RNA.715-201ENST00000517082 110 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 C8orf59P2-201ENST00000603441 271 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 AL021707.8-201ENST00000609428 183 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 Y_RNA.31-201ENST00000362574 102 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 Y_RNA.494-201ENST00000384432 111 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 Y_RNA.547-201ENST00000384654 119 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 MT-TN-201ENST00000387400 73 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 RNU6-1170P-201ENST00000515974 106 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.52□□□□□ -2.33
ATL3Q6DD88 AL512605.2-201ENST00000592972 256 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 Z83818.1-201ENST00000603584 150 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
ATL3Q6DD88 Y_RNA.30-201ENST00000362572 97 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 Y_RNA.242-201ENST00000364473 110 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 SNORA1.2-201ENST00000365189 134 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 SNORA63.7-201ENST00000365579 123 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 SNORA24-201ENST00000384096 131 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 Y_RNA.445-201ENST00000384168 102 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 SNORD105-201ENST00000386910 85 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 RNU6-308P-201ENST00000390957 107 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 RNU6-847P-201ENST00000411115 108 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 PMCHL1-202ENST00000423102 261 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 AC244023.1-201ENST00000426884 112 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 RNU6-897P-201ENST00000517135 105 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.51□□□□□ -2.33
ATL3Q6DD88 AC242498.1-201ENST00000604134 111 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 AC243994.1-201ENST00000618627 109 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 AC090971.5-201ENST00000621102 293 ntBASIC0.51□□□□□ -2.33
ATL3Q6DD88 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
ATL3Q6DD88 MIR377-201ENST00000362145 69 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 RNA5SP457-201ENST00000363657 124 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 Y_RNA.424-201ENST00000384063 103 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 RNU6-125P-201ENST00000384505 107 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 MIR802-201ENST00000390235 94 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 RNU6-823P-201ENST00000391042 103 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 RNU6-121P-201ENST00000410525 99 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 RNA5SP127-201ENST00000411051 133 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 MTCO1P5-201ENST00000433573 344 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 MRPS35P2-201ENST00000508242 191 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 AC124312.5-201ENST00000604451 268 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 MIR376A1-201ENST00000616574 68 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 AC013791.1-201ENST00000616619 62 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 AC015726.2-201ENST00000620112 122 ntBASIC0.5□□□□□ -2.33
ATL3Q6DD88 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
ATL3Q6DD88 MIR1-1-201ENST00000362147 71 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 MIR369-201ENST00000362155 70 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 Y_RNA.105-201ENST00000363182 111 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 RNU6-1138P-201ENST00000365359 106 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 Y_RNA.419-201ENST00000384041 102 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 Y_RNA.569-201ENST00000384749 103 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 MT-TD-201ENST00000387419 68 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 RNU6-994P-201ENST00000410507 111 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 RNU6-383P-201ENST00000410864 94 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 AC090844.1-201ENST00000422019 156 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 snoU13.21-201ENST00000459368 105 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 RNU7-25P-201ENST00000516544 62 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 RNU7-149P-201ENST00000516739 59 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 AC007751.1-201ENST00000529260 376 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.49□□□□□ -2.33
ATL3Q6DD88 RAC1P9-201ENST00000604990 392 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 MIR8087-201ENST00000612745 78 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 uc_338.4-201ENST00000616635 176 ntBASIC0.49□□□□□ -2.33
ATL3Q6DD88 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
ATL3Q6DD88 Y_RNA.581-201ENST00000391017 97 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 RNA5SP496-201ENST00000391240 109 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 MIR1252-201ENST00000408861 65 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 Y_RNA.602-201ENST00000410535 92 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 AC090574.1-201ENST00000623186 233 ntBASIC0.48□□□□□ -2.33
ATL3Q6DD88 RNU4-90P-201ENST00000362773 141 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 RNU6-1205P-201ENST00000363625 106 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 Y_RNA.376-201ENST00000365638 108 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 MTCO2P12-201ENST00000427426 682 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.47□□□□□ -2.33
ATL3Q6DD88 SCARNA8-201ENST00000515924 131 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 RNU6-397P-201ENST00000516226 104 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 MIR5692C2-201ENST00000577959 77 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 MIR8055-201ENST00000610739 97 ntBASIC0.47□□□□□ -2.33
ATL3Q6DD88 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.46□□□□□ -2.34
ATL3Q6DD88 Y_RNA.28-201ENST00000362554 111 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 snoU2_19.2-201ENST00000363024 80 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 RNA5SP62-201ENST00000363457 110 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 RNU6-474P-201ENST00000384243 107 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 Y_RNA.509-201ENST00000384506 99 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 Y_RNA.587-201ENST00000391210 103 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms