Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 RNU6-570P-201ENST00000517051 105 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 RNU7-181P-201ENST00000517234 74 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 MIR4503-201ENST00000582187 83 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 AP001282.2-201ENST00000616149 309 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 UBE2WP1-201ENST00000362030 340 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 Y_RNA.193-201ENST00000363979 102 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 Y_RNA.461-201ENST00000384263 103 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 RNU6-1203P-201ENST00000410703 110 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 Y_RNA.668-201ENST00000516233 93 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 RNU7-149P-201ENST00000516739 59 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 AC131055.1-201ENST00000584626 316 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 uc_338.4-201ENST00000616635 176 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 snoU18.1-201ENST00000629629 71 ntBASIC0.95□□□□□ -2.26
KRT39Q6A163 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRT39Q6A163 MIR367-201ENST00000362299 68 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU6-196P-201ENST00000384315 107 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU6-463P-201ENST00000384340 107 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU6-713P-201ENST00000384761 107 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNA5SP496-201ENST00000391240 109 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 MIR942-201ENST00000401111 86 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU2-38P-201ENST00000410856 79 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 TRBVB-201ENST00000477100 408 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 MTND1P19-201ENST00000511780 315 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU7-25P-201ENST00000516544 62 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNA5SP102-201ENST00000516865 106 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.94□□□□□ -2.26
KRT39Q6A163 AC023827.1-201ENST00000569247 97 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 AL049861.1-201ENST00000603130 150 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 7SK.10-201ENST00000621414 298 ntBASIC0.94□□□□□ -2.26
KRT39Q6A163 RNU6-654P-201ENST00000364373 107 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 Y_RNA.237-201ENST00000364439 102 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 Y_RNA.242-201ENST00000364473 110 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 RNU6-1138P-201ENST00000365359 106 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 Y_RNA.452-201ENST00000384202 108 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 Y_RNA.680-201ENST00000516441 93 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 DEFB108E-201ENST00000524692 240 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 AC109810.1-201ENST00000534066 224 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.93□□□□□ -2.26
KRT39Q6A163 MIR4724-201ENST00000579485 89 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 MIR3149-201ENST00000584629 83 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 MIR8070-201ENST00000616510 88 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 MIR6767-201ENST00000637302 66 ntBASIC0.93□□□□□ -2.26
KRT39Q6A163 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
KRT39Q6A163 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
KRT39Q6A163 RNU4-10P-201ENST00000364383 140 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 Y_RNA.293-201ENST00000364908 93 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 Y_RNA.547-201ENST00000384654 119 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 Y_RNA.562-201ENST00000384695 113 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 MIR548O-201ENST00000408583 114 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 RNA5SP247-201ENST00000411181 105 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 RNU2-13P-201ENST00000515909 113 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 SNORD77.4-201ENST00000516158 81 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 RNU11-2P-201ENST00000516898 142 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 SCARNA24.2-201ENST00000516968 130 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.92□□□□□ -2.26
KRT39Q6A163 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 MIR6516-201ENST00000630554 81 ntBASIC0.92□□□□□ -2.26
KRT39Q6A163 MIR96-201ENST00000362288 78 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 Y_RNA.14-201ENST00000362415 103 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 Y_RNA.275-201ENST00000364726 110 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 MIR526A2-201ENST00000390198 65 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 MIR1302-6-201ENST00000408466 90 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 SNORD127-201ENST00000458892 86 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 AC036111.3-201ENST00000526389 112 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 AC012433.1-201ENST00000588916 398 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 MIR4791-201ENST00000607666 84 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 U4.1-201ENST00000620349 87 ntBASIC0.91□□□□□ -2.26
KRT39Q6A163 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
KRT39Q6A163 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 Y_RNA.288-201ENST00000364854 92 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 RNU6-702P-201ENST00000364982 107 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 Y_RNA.307-201ENST00000365022 117 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 Y_RNA.370-201ENST00000365589 108 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 RNU6-211P-201ENST00000384047 107 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 SNORA51.10-201ENST00000384418 136 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 Y_RNA.537-201ENST00000384626 109 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 MIR1302-3-201ENST00000408128 138 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 RNU6-651P-201ENST00000411040 105 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 AC023449.1-201ENST00000454464 154 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.9□□□□□ -2.27
KRT39Q6A163 RNU6-1132P-201ENST00000459214 107 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 AC007751.1-201ENST00000529260 376 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.9□□□□□ -2.27
KRT39Q6A163 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 MIR548AO-201ENST00000579992 96 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 Y_RNA.802-201ENST00000614892 130 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 AC106800.4-201ENST00000614905 153 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 U2.14-201ENST00000615943 113 ntBASIC0.9□□□□□ -2.27
KRT39Q6A163 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms