Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC38Q502W7 RNU4-57P-201ENST00000515980 135 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 RNU7-25P-201ENST00000516544 62 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 MIR4503-201ENST00000582187 83 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CCDC38Q502W7 RNU6-653P-201ENST00000363074 106 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 RNY1P10-201ENST00000363268 113 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 Y_RNA.292-201ENST00000364904 97 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 RNU6-702P-201ENST00000364982 107 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 Y_RNA.478-201ENST00000384358 107 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 SNORA80D-201ENST00000384488 135 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 SNORD28B-201ENST00000390993 75 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 SNORA26-201ENST00000391286 122 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 RNU6-321P-201ENST00000410912 106 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 AC005840.1-201ENST00000498412 377 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC38Q502W7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 RNU6-365P-201ENST00000517113 106 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 AC011921.3-201ENST00000605540 361 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 AL162730.1-201ENST00000605734 292 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
CCDC38Q502W7 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 Y_RNA.20-201ENST00000362479 113 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 RNA5SP264-201ENST00000363115 107 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 RNU4-17P-201ENST00000365598 141 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 Y_RNA.452-201ENST00000384202 108 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC38Q502W7 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 SNORD116-28-201ENST00000516123 91 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 RNU6-1299P-201ENST00000516316 100 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 RNU7-181P-201ENST00000517234 74 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 AC090821.2-201ENST00000523552 176 ntBASIC1.35□□□□□ -2.19
CCDC38Q502W7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC38Q502W7 Y_RNA.193-201ENST00000363979 102 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 SNORD27-201ENST00000363981 72 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 SNORD24-201ENST00000383884 75 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 RNU6-463P-201ENST00000384340 107 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 MT-TT-201ENST00000387460 66 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 RNU6-381P-201ENST00000391259 108 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 SNORD58.1-201ENST00000391313 66 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 RNA5SP404-201ENST00000517118 132 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC38Q502W7 AP003716.2-201ENST00000528260 108 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 7SK.10-201ENST00000621414 298 ntBASIC1.34□□□□□ -2.19
CCDC38Q502W7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC38Q502W7 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 AL606845.1-201ENST00000404881 255 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC38Q502W7 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 SCARNA8-201ENST00000515924 131 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 RNU7-40P-201ENST00000516397 64 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 MIR3149-201ENST00000584629 83 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 MIR4251-201ENST00000635819 61 ntBASIC1.33□□□□□ -2.2
CCDC38Q502W7 MIR103A2-201ENST00000362154 78 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 RNY4P28-201ENST00000365281 93 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 RNU6-484P-201ENST00000384016 107 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 Y_RNA.432-201ENST00000384087 111 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 Y_RNA.477-201ENST00000384352 108 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 AC087499.4-201ENST00000448505 178 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC38Q502W7 MTND1P19-201ENST00000511780 315 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 RNA5SP153-201ENST00000516498 76 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 RNU6-504P-201ENST00000516568 104 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 RNU6-453P-201ENST00000516819 85 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 MIR3128-201ENST00000581957 66 ntBASIC1.32□□□□□ -2.2
CCDC38Q502W7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CCDC38Q502W7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC38Q502W7 Y_RNA.144-201ENST00000363521 113 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 SNORD115-28-201ENST00000363931 81 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 SNORA70.7-201ENST00000384159 133 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 Y_RNA.539-201ENST00000384635 107 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 RNU2-70P-201ENST00000410718 179 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 RNU6-847P-201ENST00000411115 108 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC38Q502W7 AC063976.4-201ENST00000421971 163 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 SNRPGP8-201ENST00000454064 226 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 RPS26P48-201ENST00000491713 339 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 RNU6-693P-201ENST00000516134 107 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 RNU6-1023P-201ENST00000516137 106 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 AC109810.1-201ENST00000534066 224 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
CCDC38Q502W7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC38Q502W7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.3□□□□□ -2.2
CCDC38Q502W7 RNU6-888P-201ENST00000363010 101 ntBASIC1.3□□□□□ -2.2
CCDC38Q502W7 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
CCDC38Q502W7 RNU6-103P-201ENST00000363686 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms