Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-1286P-201ENST00000383871 107 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 RNU6-949P-201ENST00000384040 107 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.97□□□□□ -2.88
TFF3Q07654 AC073464.1-201ENST00000429823 534 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 RNU6-531P-201ENST00000516694 104 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 RNU7-53P-201ENST00000516705 60 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 AC068339.1-201ENST00000526965 141 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 DISC2.1-201ENST00000612827 205 ntBASIC-2.97□□□□□ -2.88
TFF3Q07654 SNORD115-34-201ENST00000362441 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-29-201ENST00000362834 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-21-201ENST00000362963 81 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-14-201ENST00000363090 81 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-13-201ENST00000363358 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-11-201ENST00000363616 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-5-201ENST00000363633 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-39-201ENST00000363694 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-4-201ENST00000363810 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-16-201ENST00000363887 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-6-201ENST00000363942 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-15-201ENST00000364809 81 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-1-201ENST00000364961 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-10-201ENST00000365073 81 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-43-201ENST00000365503 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 RNU6-827P-201ENST00000365553 106 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORD115-36-201ENST00000365629 82 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 RNU6-449P-201ENST00000383914 107 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 RNU6-831P-201ENST00000384548 107 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORA25.10-201ENST00000515926 124 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 AC069113.1-201ENST00000517763 267 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 AL121655.1-201ENST00000605811 308 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 AC022418.1-201ENST00000624118 445 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 MIR376A2-201ENST00000636782 80 ntBASIC-2.98□□□□□ -2.89
TFF3Q07654 SNORA62.4-201ENST00000365504 151 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 MIR626-201ENST00000385032 94 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 RNU2-42P-201ENST00000410697 113 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.99□□□□□ -2.89
TFF3Q07654 AL117351.1-201ENST00000438864 766 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 AC141846.1-201ENST00000568348 142 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 MIR4460-201ENST00000577862 86 ntBASIC-2.99□□□□□ -2.89
TFF3Q07654 SNORD115-48-201ENST00000364764 76 ntBASIC-3□□□□□ -2.89
TFF3Q07654 SNORA20.2-201ENST00000383922 131 ntBASIC-3□□□□□ -2.89
TFF3Q07654 RNU6-325P-201ENST00000411132 105 ntBASIC-3□□□□□ -2.89
TFF3Q07654 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-3□□□□□ -2.89
TFF3Q07654 RNU7-13P-201ENST00000516413 62 ntBASIC-3□□□□□ -2.89
TFF3Q07654 AC009159.2-201ENST00000617603 606 ntBASIC-3□□□□□ -2.89
TFF3Q07654 SNORD114-7-201ENST00000362520 77 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 SNORD115-8-201ENST00000363856 82 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 SNORD115-23-201ENST00000364461 82 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 SNORD115-38-201ENST00000365037 82 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 MIR519E-201ENST00000385075 84 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 MIR652-201ENST00000385278 98 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 AC145350.1-201ENST00000567426 208 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 AC027807.2-201ENST00000616099 408 ntBASIC-3.01□□□□□ -2.89
TFF3Q07654 AC073343.1-201ENST00000328239 651 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 RNA5SP26-201ENST00000362406 119 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 Y_RNA.302-201ENST00000364997 102 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 RNU6-760P-201ENST00000516078 97 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 AC091144.1-201ENST00000519573 138 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 MIR548H5-201ENST00000580314 60 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 AC107905.1-201ENST00000616204 426 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 AL163152.1-201ENST00000642001 374 ntBASIC-3.02□□□□□ -2.89
TFF3Q07654 Y_RNA.2-201ENST00000362330 96 ntBASIC-3.03□□□□□ -2.89
TFF3Q07654 Y_RNA.328-201ENST00000365208 113 ntBASIC-3.03□□□□□ -2.89
TFF3Q07654 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-3.03□□□□□ -2.89
TFF3Q07654 RNU6-746P-201ENST00000384112 109 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 MIR617-201ENST00000385030 97 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 MIR599-201ENST00000385069 95 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-3.04□□□□□ -2.9
TFF3Q07654 AL049861.1-201ENST00000603130 150 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 AC124312.5-201ENST00000604451 268 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 U4.1-201ENST00000620349 87 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 AC007671.2-201ENST00000637344 619 ntBASIC-3.04□□□□□ -2.9
TFF3Q07654 RNU6-230P-201ENST00000362457 104 ntBASIC-3.05□□□□□ -2.9
TFF3Q07654 RNU6-400P-201ENST00000391173 106 ntBASIC-3.05□□□□□ -2.9
TFF3Q07654 AL078595.1-201ENST00000404458 226 ntBASIC-3.05□□□□□ -2.9
TFF3Q07654 TPTE2P1-204ENST00000435256 593 ntBASIC-3.05□□□□□ -2.9
TFF3Q07654 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-3.05□□□□□ -2.9
TFF3Q07654 Y_RNA.103-201ENST00000363171 102 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 RNU5B-1-201ENST00000363286 116 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 MTCO2P16-201ENST00000436962 677 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 MTCO1P27-201ENST00000448269 226 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 AC097635.1-201ENST00000450678 155 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-3.06□□□□□ -2.9
TFF3Q07654 RNU7-10P-201ENST00000607194 63 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 AC091931.1-201ENST00000623488 728 ntBASIC-3.06□□□□□ -2.9
TFF3Q07654 RNU6-1246P-201ENST00000391064 107 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 SNORA26.4-201ENST00000391188 123 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 MTCO1P57-201ENST00000432182 261 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 MTND2P6-201ENST00000455337 1030 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 MTCO1P29-201ENST00000496868 288 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 RNU6-720P-201ENST00000516363 108 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 SNORA25.14-201ENST00000516481 132 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 RNU7-51P-201ENST00000516560 62 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 AC005828.6-201ENST00000606610 232 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 AC100814.1-201ENST00000606963 623 ntBASIC-3.07□□□□□ -2.9
TFF3Q07654 UBE2D3P4-201ENST00000441973 436 ntBASIC-3.08□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms