Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL353621.2-201ENST00000605340 133 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.1□□□□□ -2.23
CDK3Q00526 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
CDK3Q00526 Y_RNA.277-201ENST00000364754 102 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 MIR568-201ENST00000385036 95 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.09□□□□□ -2.23
CDK3Q00526 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.09□□□□□ -2.23
CDK3Q00526 Y_RNA.666-201ENST00000516187 112 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 RNU7-25P-201ENST00000516544 62 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 MIR4662B-201ENST00000579498 81 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 MIR4282-201ENST00000583613 67 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 AC008133.2-201ENST00000624540 351 ntBASIC1.09□□□□□ -2.23
CDK3Q00526 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
CDK3Q00526 RNA5SP264-201ENST00000363115 107 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 RNA5SP48-201ENST00000363969 126 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 Y_RNA.304-201ENST00000365011 112 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 Y_RNA.486-201ENST00000384398 107 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 Y_RNA.547-201ENST00000384654 119 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 Y_RNA.556-201ENST00000384677 113 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 SNORD12-201ENST00000391002 90 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 AL118496.2-201ENST00000448300 230 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.08□□□□□ -2.24
CDK3Q00526 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 RNU4-57P-201ENST00000515980 135 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
CDK3Q00526 MIR4643-201ENST00000577473 78 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 AL365265.1-201ENST00000621045 234 ntBASIC1.08□□□□□ -2.24
CDK3Q00526 MIR103A2-201ENST00000362154 78 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 Y_RNA.416-201ENST00000384014 113 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 RNU6-1067P-201ENST00000384752 107 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 SNORA75.2-201ENST00000391138 150 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 SNORA75.3-201ENST00000391231 150 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 MIR548H3-201ENST00000408771 118 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 RNU6-1132P-201ENST00000459214 107 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 RPS26P48-201ENST00000491713 339 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 MIR4251-201ENST00000635819 61 ntBASIC1.07□□□□□ -2.24
CDK3Q00526 SNORA1.2-201ENST00000365189 134 ntBASIC1.06□□□□□ -2.24
CDK3Q00526 Y_RNA.370-201ENST00000365589 108 ntBASIC1.06□□□□□ -2.24
CDK3Q00526 MT-TT-201ENST00000387460 66 ntBASIC1.06□□□□□ -2.24
CDK3Q00526 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.06□□□□□ -2.24
CDK3Q00526 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
CDK3Q00526 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
CDK3Q00526 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
CDK3Q00526 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDK3Q00526 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CDK3Q00526 snoU2_19.4-201ENST00000364329 80 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 Y_RNA.226-201ENST00000364337 114 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 Y_RNA.330-201ENST00000365230 109 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 MIR499A-201ENST00000384903 122 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 RNA5SP247-201ENST00000411181 105 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
CDK3Q00526 MTND3P2-201ENST00000438452 342 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.05□□□□□ -2.24
CDK3Q00526 RNU7-21P-201ENST00000459430 62 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 RNU6-126P-201ENST00000516685 103 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 RNU6-365P-201ENST00000517113 106 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 AP003716.2-201ENST00000528260 108 ntBASIC1.05□□□□□ -2.24
CDK3Q00526 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CDK3Q00526 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 Y_RNA.76-201ENST00000362931 109 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 SNORD27-201ENST00000363981 72 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 Y_RNA.562-201ENST00000384695 113 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 MIR1185-1-201ENST00000408598 86 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 Y_RNA.622-201ENST00000411091 108 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 RNU7-90P-201ENST00000459216 62 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 SCARNA8-201ENST00000515924 131 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 RNU6-693P-201ENST00000516134 107 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 Y_RNA.668-201ENST00000516233 93 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 RNU6-1299P-201ENST00000516316 100 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 RNU6-453P-201ENST00000516819 85 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 AC109810.1-201ENST00000534066 224 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
CDK3Q00526 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 AL442067.1-201ENST00000613261 223 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
CDK3Q00526 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDK3Q00526 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
CDK3Q00526 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 Y_RNA.262-201ENST00000364641 102 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 Y_RNA.292-201ENST00000364904 97 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 RNY3P5-201ENST00000384127 102 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 Y_RNA.477-201ENST00000384352 108 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 MIR616-201ENST00000385293 97 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 AL606845.1-201ENST00000404881 255 ntBASIC1.03□□□□□ -2.24
CDK3Q00526 RNU2-70P-201ENST00000410718 179 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms