Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-958P-201ENST00000516995 106 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 AC245014.2-201ENST00000603689 287 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 AP001282.2-201ENST00000616149 309 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 AL445584.3-201ENST00000617173 78 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 SNORD74.6-201ENST00000364796 70 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-449P-201ENST00000383914 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-468P-201ENST00000384003 109 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU7-116P-201ENST00000516940 62 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.57□□□□□ -2.5
HSPG2P98160 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.57□□□□□ -2.5
HSPG2P98160 MIR410-201ENST00000362222 80 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-268P-201ENST00000364174 107 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-715P-201ENST00000365204 103 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 USMG5P1-201ENST00000425964 177 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-118P-201ENST00000516552 102 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 AL391262.2-201ENST00000622466 494 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 MIR487A-201ENST00000385009 80 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 USP9YP30-201ENST00000430729 455 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-759P-201ENST00000516740 103 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 MTND1P35-201ENST00000526739 508 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 MIR6502-201ENST00000617296 76 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-179P-201ENST00000363350 107 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-224P-201ENST00000384055 107 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-429P-201ENST00000384582 108 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 MIR527-201ENST00000385244 85 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
HSPG2P98160 MIR548I3-201ENST00000408378 149 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU2-29P-201ENST00000410423 189 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RPS29P24-201ENST00000486345 171 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.58□□□□□ -2.5
HSPG2P98160 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
HSPG2P98160 AC005828.6-201ENST00000606610 232 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 AL121757.2-201ENST00000611223 313 ntBASIC-0.58□□□□□ -2.5
HSPG2P98160 RNU6-517P-201ENST00000384362 110 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MIR450B-201ENST00000401182 78 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RPL30P15-201ENST00000457129 321 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 SERF1AP1-201ENST00000514575 187 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.59□□□□□ -2.5
HSPG2P98160 MIR4307-201ENST00000582802 84 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AC087752.4-201ENST00000605911 462 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MIR6818-201ENST00000621576 65 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MIR20A-201ENST00000362279 71 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 SNORD115-28-201ENST00000363931 81 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MIR29B1-201ENST00000385015 81 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU2-14P-201ENST00000411053 191 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MTND1P27-201ENST00000451117 902 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU7-25P-201ENST00000516544 62 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AC100767.1-201ENST00000528178 123 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 UBL5P4-201ENST00000562584 236 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MIR4775-201ENST00000581168 75 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 SNORA40.5-201ENST00000391061 128 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 MTND2P18-201ENST00000419962 1030 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU6-893P-201ENST00000458841 100 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.59□□□□□ -2.5
HSPG2P98160 MTND5P40-201ENST00000559945 246 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 CPDP1-201ENST00000579660 283 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 JPX_2.1-201ENST00000614161 69 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AC009248.2-201ENST00000619826 254 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU6-973P-201ENST00000364690 107 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU4-66P-201ENST00000365199 138 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 USP9YP23-201ENST00000455085 407 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 RNU6-479P-201ENST00000516348 105 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AL008718.3-201ENST00000610217 321 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AL158209.2-201ENST00000619266 216 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 AC009878.1-201ENST00000621819 340 ntBASIC-0.59□□□□□ -2.5
HSPG2P98160 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-727P-201ENST00000363592 107 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 SNORD115-23-201ENST00000364461 82 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 MTND3P23-201ENST00000431980 347 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC084290.1-201ENST00000434995 374 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC112204.1-201ENST00000502591 103 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC007671.2-201ENST00000637344 619 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 SNORD115-35-201ENST00000365122 82 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-926P-201ENST00000384075 107 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 SNORA27-201ENST00000384323 126 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AL031003.1-201ENST00000404229 172 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-325P-201ENST00000411132 105 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RPS27AP14-201ENST00000422868 454 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 CYCSP46-201ENST00000423569 204 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC091179.3-201ENST00000474761 144 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC245884.10-201ENST00000597355 337 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC124312.5-201ENST00000604451 268 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AL607023.1-201ENST00000620045 248 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 snoR1.1-201ENST00000628177 80 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 SNORA63.5-201ENST00000363548 123 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms