Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU2-55P-201ENST00000411146 174 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 Y_RNA.626-201ENST00000411288 95 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.11□□□□□ -2.23
CX3CL1P78423 AL133373.1-201ENST00000497098 94 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 RNU6-1299P-201ENST00000516316 100 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 RNU6-365P-201ENST00000517113 106 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 ZNF209P-201ENST00000593450 2304 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 Y_RNA.66-201ENST00000362862 102 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 SNORD45.3-201ENST00000363836 72 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 RNY1-201ENST00000364228 113 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 MIR570-201ENST00000384917 97 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 MIR518F-201ENST00000384973 87 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 MIR150-201ENST00000385048 84 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 SNRPGP8-201ENST00000454064 226 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
CX3CL1P78423 RNU1-92P-201ENST00000517017 135 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 RNU6-1270P-201ENST00000517128 108 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 AL512598.1-201ENST00000610158 273 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
CX3CL1P78423 RNU6-103P-201ENST00000363686 107 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 Y_RNA.199-201ENST00000364014 102 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 RNU6-923P-201ENST00000364753 107 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 Y_RNA.634-201ENST00000364811 113 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 SNORD24-201ENST00000383884 75 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 SNORD61-201ENST00000384252 73 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CX3CL1P78423 RNU6-482P-201ENST00000391068 107 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 SNORA26-201ENST00000391286 122 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 RNU4-62P-201ENST00000410125 130 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 RNU2-70P-201ENST00000410718 179 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 RNU6-693P-201ENST00000516134 107 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 RNU6-561P-201ENST00000516222 102 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 AC097639.2-201ENST00000603159 172 ntBASIC1.09□□□□□ -2.23
CX3CL1P78423 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.09□□□□□ -2.24
CX3CL1P78423 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.24
CX3CL1P78423 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CX3CL1P78423 RNU6-888P-201ENST00000363010 101 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 SNORA25.3-201ENST00000363205 127 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 SNORD115-28-201ENST00000363931 81 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 SNORA1.2-201ENST00000365189 134 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 Y_RNA.370-201ENST00000365589 108 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 MIR758-201ENST00000390227 88 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 Y_RNA.618-201ENST00000410949 107 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 AC108667.1-201ENST00000428618 249 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 RNA5SP153-201ENST00000516498 76 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CX3CL1P78423 AC109810.1-201ENST00000534066 224 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 MIR4308-201ENST00000580634 81 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 MIR4251-201ENST00000635819 61 ntBASIC1.08□□□□□ -2.24
CX3CL1P78423 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CX3CL1P78423 MIR103A2-201ENST00000362154 78 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 RNA5SP264-201ENST00000363115 107 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 RNU6-728P-201ENST00000365375 104 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 Y_RNA.401-201ENST00000383965 117 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 Y_RNA.489-201ENST00000384410 101 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 SNORA75.2-201ENST00000391138 150 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 SNORA75.3-201ENST00000391231 150 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 RNU6-504P-201ENST00000516568 104 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 DNAJC19P9-201ENST00000555084 351 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 MIR4744-201ENST00000581563 82 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 RNU2-4P-201ENST00000606190 192 ntBASIC1.07□□□□□ -2.24
CX3CL1P78423 Y_RNA.7-201ENST00000362352 102 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 Y_RNA.37-201ENST00000362606 108 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 Y_RNA.188-201ENST00000363952 111 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 RNU6-938P-201ENST00000411285 103 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 RPS26P48-201ENST00000491713 339 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 RNU6-197P-201ENST00000516680 100 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 RNU6-1271P-201ENST00000517049 105 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 MIR4791-201ENST00000607666 84 ntBASIC1.06□□□□□ -2.24
CX3CL1P78423 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.06□□□□□ -2.24
CX3CL1P78423 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
CX3CL1P78423 Y_RNA.140-201ENST00000363474 103 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 Y_RNA.200-201ENST00000364018 102 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 Y_RNA.238-201ENST00000364441 102 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 Y_RNA.241-201ENST00000364470 117 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 SNORA51.10-201ENST00000384418 136 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 SNORA80D-201ENST00000384488 135 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 Y_RNA.537-201ENST00000384626 109 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 RNU6-1067P-201ENST00000384752 107 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 MIR1185-1-201ENST00000408598 86 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 RNU4-43P-201ENST00000410628 137 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 RNU6-847P-201ENST00000411115 108 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.05□□□□□ -2.24
CX3CL1P78423 AC087499.4-201ENST00000448505 178 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 RNU1-123P-201ENST00000458950 160 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 RNU7-95P-201ENST00000459222 64 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 RNU2-13P-201ENST00000515909 113 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms