Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AF228730.3-201ENST00000436691 102 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 HMGN2P32-201ENST00000444648 269 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 CYCTP-201ENST00000504253 315 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 SUB1P4-201ENST00000566062 339 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 SNRPGP19-201ENST00000603826 189 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 U1.36-201ENST00000620684 176 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
HERVK_113P62684 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 SNORD77.3-201ENST00000391113 65 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 U8.16-201ENST00000391279 133 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 RNA5SP247-201ENST00000411181 105 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
HERVK_113P62684 AC078899.2-201ENST00000595282 212 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 AL359881.1-201ENST00000602916 267 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
HERVK_113P62684 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HERVK_113P62684 MTND5P32-201ENST00000560711 1802 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 MIRLET7C-201ENST00000362160 84 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 Y_RNA.4-201ENST00000362333 112 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU6-508P-201ENST00000363231 103 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU6-112P-201ENST00000363599 104 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU6-309P-201ENST00000364573 106 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU6-1292P-201ENST00000383856 107 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 SNORA17.3-201ENST00000391159 129 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 MIR891A-201ENST00000401237 79 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 AC108667.1-201ENST00000428618 249 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU7-107P-201ENST00000459121 61 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNA5SP168-201ENST00000516642 112 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 RNU2-60P-201ENST00000517290 128 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.24□□□□□ -2.05
HERVK_113P62684 MIR4709-201ENST00000577272 72 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.24□□□□□ -2.05
HERVK_113P62684 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.24□□□□□ -2.05
HERVK_113P62684 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.24□□□□□ -2.05
HERVK_113P62684 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.23□□□□□ -2.05
HERVK_113P62684 SNORD115-28-201ENST00000363931 81 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 RNU6-296P-201ENST00000384608 107 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 AL603914.1-201ENST00000401964 204 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 RNU6-735P-201ENST00000410612 107 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 SNRPGP14-201ENST00000435400 219 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 AC003989.2-201ENST00000440224 169 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 MTATP6P21-201ENST00000440681 189 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.23□□□□□ -2.05
HERVK_113P62684 RNU1-40P-201ENST00000516816 164 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 RNU1-97P-201ENST00000516872 164 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 AC134878.1-201ENST00000619901 243 ntBASIC2.23□□□□□ -2.05
HERVK_113P62684 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 RNU6-424P-201ENST00000384367 105 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 SNORD38C-201ENST00000384381 69 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 Y_RNA.525-201ENST00000384570 113 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.22□□□□□ -2.05
HERVK_113P62684 RNA5SP57-201ENST00000459463 123 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 RNU6-1149P-201ENST00000516810 97 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
HERVK_113P62684 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.22□□□□□ -2.05
HERVK_113P62684 MIR4498-201ENST00000577599 66 ntBASIC2.22□□□□□ -2.05
HERVK_113P62684 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.22□□□□□ -2.05
HERVK_113P62684 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HERVK_113P62684 Y_RNA.114-201ENST00000363265 113 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 Y_RNA.164-201ENST00000363709 102 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 RNA5SP205-201ENST00000364653 136 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 snoU13.27-201ENST00000459278 104 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 RNA5SP481-201ENST00000516814 122 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 AC090049.2-201ENST00000550377 109 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 MIR3121-201ENST00000579680 77 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 AL022345.2-201ENST00000606307 135 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 AC027279.3-201ENST00000625055 122 ntBASIC2.21□□□□□ -2.06
HERVK_113P62684 Y_RNA.37-201ENST00000362606 108 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 RNU6-1189P-201ENST00000383958 107 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 AC093850.1-201ENST00000454121 251 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 AC108729.3-201ENST00000513484 108 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 RNU6-1061P-201ENST00000516530 99 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 MIR376A2-201ENST00000636782 80 ntBASIC2.2□□□□□ -2.06
HERVK_113P62684 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HERVK_113P62684 SNORA2.2-201ENST00000365473 135 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 Y_RNA.410-201ENST00000383992 113 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 RNA5SP100-201ENST00000410903 110 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 RNA5SP59-201ENST00000410922 110 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.19□□□□□ -2.06
HERVK_113P62684 AC015922.2-201ENST00000435593 184 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 AL158147.1-201ENST00000443970 75 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.19□□□□□ -2.06
HERVK_113P62684 RNU6-659P-201ENST00000516454 104 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 SNORD36C-201ENST00000516733 66 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 AC133485.4-201ENST00000561835 220 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 AC138907.4-201ENST00000570107 226 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 MIR5197-201ENST00000583721 112 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 MIR4448-201ENST00000584360 86 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 AC021506.2-201ENST00000612354 169 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms