Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.66□□□□□ -2.68
CKS1BP61024 AL118558.2-201ENST00000556294 238 ntBASIC-1.66□□□□□ -2.68
CKS1BP61024 MIR4423-201ENST00000580922 80 ntBASIC-1.66□□□□□ -2.68
CKS1BP61024 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.67□□□□□ -2.68
CKS1BP61024 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.67□□□□□ -2.68
CKS1BP61024 SNORA40.3-201ENST00000390964 122 ntBASIC-1.67□□□□□ -2.68
CKS1BP61024 SNORD113-6-201ENST00000363345 75 ntBASIC-1.68□□□□□ -2.68
CKS1BP61024 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.68□□□□□ -2.68
CKS1BP61024 SNORD57-201ENST00000448188 72 ntBASIC-1.68□□□□□ -2.68
CKS1BP61024 RPS29P24-201ENST00000486345 171 ntBASIC-1.68□□□□□ -2.68
CKS1BP61024 SNORA25.16-201ENST00000516741 121 ntBASIC-1.68□□□□□ -2.68
CKS1BP61024 SNORA18.6-201ENST00000516792 115 ntBASIC-1.68□□□□□ -2.68
CKS1BP61024 MIR548O-201ENST00000408583 114 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 BX295541.1-201ENST00000417774 250 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 USP9YP30-201ENST00000430729 455 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 MTND3P21-201ENST00000433774 331 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 snoU109.3-201ENST00000459477 145 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 MIR3115-201ENST00000577915 68 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 MIR2681-201ENST00000581814 105 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 AC245884.10-201ENST00000597355 337 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.69□□□□□ -2.68
CKS1BP61024 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 MIR517A-201ENST00000385001 87 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 MIR548I3-201ENST00000408378 149 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 MTATP6P13-201ENST00000438531 667 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 RPL30P15-201ENST00000457129 321 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 RNU7-188P-201ENST00000517063 64 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 MIR4306-201ENST00000583390 91 ntBASIC-1.7□□□□□ -2.68
CKS1BP61024 RNU6-502P-201ENST00000362419 108 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 RNU4-32P-201ENST00000363404 141 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 RNA5SP403-201ENST00000363598 108 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 RNU6-595P-201ENST00000363944 107 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 SNORA27-201ENST00000384323 126 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 RNU6-601P-201ENST00000384540 107 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.71□□□□□ -2.68
CKS1BP61024 RNA5SP484-201ENST00000458857 111 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.71□□□□□ -2.68
CKS1BP61024 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.71□□□□□ -2.68
CKS1BP61024 AL356055.1-201ENST00000602528 446 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 AL158050.2-201ENST00000605336 568 ntBASIC-1.71□□□□□ -2.68
CKS1BP61024 AC141846.1-201ENST00000568348 142 ntBASIC-1.72□□□□□ -2.68
CKS1BP61024 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.72□□□□□ -2.68
CKS1BP61024 AC004467.1-201ENST00000615678 330 ntBASIC-1.72□□□□□ -2.68
CKS1BP61024 AL354950.2-201ENST00000617939 290 ntBASIC-1.72□□□□□ -2.68
CKS1BP61024 MIR4320-201ENST00000636981 65 ntBASIC-1.72□□□□□ -2.68
CKS1BP61024 RNU6-879P-201ENST00000364328 108 ntBASIC-1.73□□□□□ -2.69
CKS1BP61024 AL445193.1-201ENST00000441183 141 ntBASIC-1.73□□□□□ -2.69
CKS1BP61024 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.73□□□□□ -2.69
CKS1BP61024 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.73□□□□□ -2.69
CKS1BP61024 MIR409-201ENST00000362237 79 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 RNU6-702P-201ENST00000364982 107 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 RNU6-949P-201ENST00000384040 107 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 RNU6-38P-201ENST00000384085 107 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 MIR9-2-201ENST00000384838 87 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 SNORD77.3-201ENST00000391113 65 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.74□□□□□ -2.69
CKS1BP61024 RNA5SP476-201ENST00000516613 103 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 ELOCP32-201ENST00000548625 324 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 AP003357.1-201ENST00000604497 148 ntBASIC-1.74□□□□□ -2.69
CKS1BP61024 RNU6-653P-201ENST00000363074 106 ntBASIC-1.75□□□□□ -2.69
CKS1BP61024 RNU4-66P-201ENST00000365199 138 ntBASIC-1.75□□□□□ -2.69
CKS1BP61024 SNORD42A-201ENST00000459584 64 ntBASIC-1.75□□□□□ -2.69
CKS1BP61024 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
CKS1BP61024 MIR4509-3-201ENST00000578671 94 ntBASIC-1.75□□□□□ -2.69
CKS1BP61024 MIR4509-2-201ENST00000583920 94 ntBASIC-1.75□□□□□ -2.69
CKS1BP61024 MIR4509-1-201ENST00000618224 94 ntBASIC-1.75□□□□□ -2.69
CKS1BP61024 RNU6-865P-201ENST00000364772 107 ntBASIC-1.76□□□□□ -2.69
CKS1BP61024 RNU6-95P-201ENST00000384697 107 ntBASIC-1.76□□□□□ -2.69
CKS1BP61024 SNORD37.1-201ENST00000390968 65 ntBASIC-1.76□□□□□ -2.69
CKS1BP61024 RNU4-55P-201ENST00000410731 137 ntBASIC-1.76□□□□□ -2.69
CKS1BP61024 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.76□□□□□ -2.69
CKS1BP61024 MTND1P11-201ENST00000456661 876 ntBASIC-1.76□□□□□ -2.69
CKS1BP61024 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.76□□□□□ -2.69
CKS1BP61024 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.76□□□□□ -2.69
CKS1BP61024 AC040926.1-201ENST00000530195 238 ntBASIC-1.76□□□□□ -2.69
CKS1BP61024 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.76□□□□□ -2.69
CKS1BP61024 SNORD115-28-201ENST00000363931 81 ntBASIC-1.77□□□□□ -2.69
CKS1BP61024 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.77□□□□□ -2.69
CKS1BP61024 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.77□□□□□ -2.69
CKS1BP61024 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.77□□□□□ -2.69
CKS1BP61024 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.77□□□□□ -2.69
CKS1BP61024 AC127455.1-201ENST00000565496 145 ntBASIC-1.77□□□□□ -2.69
CKS1BP61024 AC140658.3-201ENST00000567603 271 ntBASIC-1.77□□□□□ -2.69
CKS1BP61024 AC124303.1-201ENST00000605703 360 ntBASIC-1.77□□□□□ -2.69
CKS1BP61024 RNU4-58P-201ENST00000363192 141 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 SNORD114-29-201ENST00000364819 70 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 RNU6-901P-201ENST00000384593 106 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 RNU6-297P-201ENST00000384636 107 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.78□□□□□ -2.69
CKS1BP61024 RNU7-96P-201ENST00000459535 64 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 MIR4280-201ENST00000582178 76 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 AC019193.3-201ENST00000609144 554 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 MIR6851-201ENST00000617060 67 ntBASIC-1.78□□□□□ -2.69
CKS1BP61024 RNU6-596P-201ENST00000365395 98 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms