Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORA18.7-201ENST00000516910 131 ntBASIC1.92□□□□□ -2.1
CLRN1P58418 RNU7-181P-201ENST00000517234 74 ntBASIC1.92□□□□□ -2.1
CLRN1P58418 AC090049.2-201ENST00000550377 109 ntBASIC1.92□□□□□ -2.1
CLRN1P58418 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
CLRN1P58418 RNU6-1290P-201ENST00000362957 109 ntBASIC1.91□□□□□ -2.1
CLRN1P58418 RNU6-457P-201ENST00000363999 107 ntBASIC1.91□□□□□ -2.1
CLRN1P58418 RNA5SP205-201ENST00000364653 136 ntBASIC1.91□□□□□ -2.1
CLRN1P58418 MIR526A1-201ENST00000384897 85 ntBASIC1.91□□□□□ -2.1
CLRN1P58418 MIR136-201ENST00000385207 82 ntBASIC1.91□□□□□ -2.1
CLRN1P58418 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
CLRN1P58418 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.91□□□□□ -2.1
CLRN1P58418 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
CLRN1P58418 Y_RNA.241-201ENST00000364470 117 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 U8.17-201ENST00000391292 132 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 RN7SKP192-201ENST00000411291 327 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 AC008413.1-201ENST00000511864 177 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 SNORD53-201ENST00000579969 78 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 AC095038.3-201ENST00000634439 195 ntBASIC1.9□□□□□ -2.11
CLRN1P58418 RNU6-1123P-201ENST00000362347 106 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 RNU6-647P-201ENST00000364243 107 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 MIR194-1-201ENST00000384892 85 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 SNORA40.5-201ENST00000391061 128 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 MIR1267-201ENST00000408723 78 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
CLRN1P58418 AL356320.1-201ENST00000429616 163 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 RN7SL429P-201ENST00000479090 223 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 RN7SL489P-201ENST00000486185 223 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 RN7SL327P-201ENST00000488659 223 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.89□□□□□ -2.11
CLRN1P58418 RN7SKP179-201ENST00000516126 217 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 AL359881.1-201ENST00000602916 267 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 AC108081.1-201ENST00000604358 221 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 RN7SL853P-201ENST00000617250 223 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CLRN1P58418 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
CLRN1P58418 RNA5SP126-201ENST00000365092 109 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 Y_RNA.351-201ENST00000365436 96 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLRN1P58418 RNU6-735P-201ENST00000410612 107 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 AC004965.1-201ENST00000413033 213 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.88□□□□□ -2.11
CLRN1P58418 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 RPS26P48-201ENST00000491713 339 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 RNU6-772P-201ENST00000516042 105 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 RNU6-1061P-201ENST00000516530 99 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLRN1P58418 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.88□□□□□ -2.11
CLRN1P58418 FAM106DP-201ENST00000586416 501 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 AC106754.2-201ENST00000623006 233 ntBASIC1.88□□□□□ -2.11
CLRN1P58418 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLRN1P58418 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
CLRN1P58418 MIR342-201ENST00000362212 99 ntBASIC1.87□□□□□ -2.11
CLRN1P58418 RNU6-414P-201ENST00000363705 104 ntBASIC1.87□□□□□ -2.11
CLRN1P58418 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
CLRN1P58418 RNU7-70P-201ENST00000516941 66 ntBASIC1.87□□□□□ -2.11
CLRN1P58418 AC133485.4-201ENST00000561835 220 ntBASIC1.87□□□□□ -2.11
CLRN1P58418 AC138907.4-201ENST00000570107 226 ntBASIC1.87□□□□□ -2.11
CLRN1P58418 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
CLRN1P58418 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLRN1P58418 ZNF658B-202ENST00000615961 3375 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLRN1P58418 RNA5SP37-201ENST00000365420 130 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 Y_RNA.617-201ENST00000410920 90 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 SNX2P2-201ENST00000424553 323 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 JTBP1-201ENST00000441314 247 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 SNORD123-201ENST00000459473 70 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.86□□□□□ -2.11
CLRN1P58418 RN7SKP19-201ENST00000516016 252 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 RNU6-113P-201ENST00000516653 101 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 Y_RNA.712-201ENST00000517011 92 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 AC090821.2-201ENST00000523552 176 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 DEFB122-202ENST00000569013 197 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
CLRN1P58418 SNORD115-34-201ENST00000362441 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-12-201ENST00000362583 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-29-201ENST00000362834 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-9-201ENST00000362912 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-21-201ENST00000362963 81 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-14-201ENST00000363090 81 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-13-201ENST00000363358 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-41-201ENST00000363608 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-11-201ENST00000363616 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-5-201ENST00000363633 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-39-201ENST00000363694 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-4-201ENST00000363810 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-16-201ENST00000363887 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-6-201ENST00000363942 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-42-201ENST00000364273 82 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms