Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU7-43P-201ENST00000516554 64 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 Y_RNA.37-201ENST00000362606 108 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 RNU4-84P-201ENST00000364200 139 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 Y_RNA.337-201ENST00000365312 102 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 Y_RNA.410-201ENST00000383992 113 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 Y_RNA.555-201ENST00000384673 110 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 RNU6-239P-201ENST00000390990 99 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.63□□□□□ -2.15
SUMO3P55854 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.63□□□□□ -2.15
SUMO3P55854 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 AL365205.2-201ENST00000594586 68 ntBASIC1.63□□□□□ -2.15
SUMO3P55854 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SUMO3P55854 RNU6-886P-201ENST00000384319 105 ntBASIC1.62□□□□□ -2.15
SUMO3P55854 RNU6-1067P-201ENST00000384752 107 ntBASIC1.62□□□□□ -2.15
SUMO3P55854 MIR520C-201ENST00000385005 87 ntBASIC1.62□□□□□ -2.15
SUMO3P55854 RNU6-1135P-201ENST00000411083 103 ntBASIC1.62□□□□□ -2.15
SUMO3P55854 RNU7-121P-201ENST00000516604 62 ntBASIC1.62□□□□□ -2.15
SUMO3P55854 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.62□□□□□ -2.15
SUMO3P55854 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
SUMO3P55854 RNU6-597P-201ENST00000365620 102 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 RNU6-1292P-201ENST00000383856 107 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 SNORA1-201ENST00000384107 130 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 Y_RNA.521-201ENST00000384560 114 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SUMO3P55854 RNU5E-9P-201ENST00000411164 104 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 AF228730.3-201ENST00000436691 102 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 RNU7-181P-201ENST00000517234 74 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 MIR4764-201ENST00000580680 88 ntBASIC1.61□□□□□ -2.15
SUMO3P55854 Y_RNA.150-201ENST00000363562 102 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 SNORA25.7-201ENST00000364375 127 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 Y_RNA.370-201ENST00000365589 108 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 SNORA40.5-201ENST00000391061 128 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 RNU6-938P-201ENST00000411285 103 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 snoU13.26-201ENST00000459452 105 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 AC107297.1-201ENST00000459991 176 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 AC074198.2-201ENST00000508153 258 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 AP003484.1-201ENST00000530974 250 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.6□□□□□ -2.15
SUMO3P55854 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
SUMO3P55854 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
SUMO3P55854 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
SUMO3P55854 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-34-201ENST00000362441 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-12-201ENST00000362583 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-29-201ENST00000362834 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-9-201ENST00000362912 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-21-201ENST00000362963 81 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-14-201ENST00000363090 81 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-13-201ENST00000363358 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-41-201ENST00000363608 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-11-201ENST00000363616 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-5-201ENST00000363633 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-39-201ENST00000363694 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-4-201ENST00000363810 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-16-201ENST00000363887 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-6-201ENST00000363942 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-42-201ENST00000364273 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-15-201ENST00000364809 81 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-1-201ENST00000364961 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-26-201ENST00000365067 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-10-201ENST00000365073 81 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-43-201ENST00000365503 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-36-201ENST00000365629 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 Y_RNA.393-201ENST00000383936 102 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 RNU6-1189P-201ENST00000383958 107 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD28B-201ENST00000390993 75 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD77.3-201ENST00000391113 65 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORA26.9-201ENST00000391322 122 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 PCNPP3-201ENST00000393579 471 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 RPL39P39-201ENST00000455840 151 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD111.1-201ENST00000516421 86 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 MIR3129-201ENST00000581095 76 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 SNORD115-40-201ENST00000606510 82 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 MIR6845-201ENST00000613182 61 ntBASIC1.59□□□□□ -2.15
SUMO3P55854 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SUMO3P55854 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
SUMO3P55854 Y_RNA.180-201ENST00000363867 113 ntBASIC1.58□□□□□ -2.16
SUMO3P55854 Y_RNA.272-201ENST00000364696 102 ntBASIC1.58□□□□□ -2.16
SUMO3P55854 Y_RNA.537-201ENST00000384626 109 ntBASIC1.58□□□□□ -2.16
SUMO3P55854 Y_RNA.241-201ENST00000364470 117 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 MIR1261-201ENST00000408659 82 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 RNU6-394P-201ENST00000410735 107 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 RPS26P48-201ENST00000491713 339 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 RNU2-13P-201ENST00000515909 113 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms