Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.01□□□□□ -2.25
LIMK1P53667 SNORD11-201ENST00000459124 84 ntBASIC1.01□□□□□ -2.25
LIMK1P53667 RNU7-21P-201ENST00000459430 62 ntBASIC1.01□□□□□ -2.25
LIMK1P53667 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.01□□□□□ -2.25
LIMK1P53667 AC006006.1-201ENST00000603082 144 ntBASIC1.01□□□□□ -2.25
LIMK1P53667 AL049861.1-201ENST00000603130 150 ntBASIC1.01□□□□□ -2.25
LIMK1P53667 RNA5SP48-201ENST00000363969 126 ntBASIC1□□□□□ -2.25
LIMK1P53667 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
LIMK1P53667 RNU1-36P-201ENST00000365130 165 ntBASIC1□□□□□ -2.25
LIMK1P53667 SNORA75.2-201ENST00000391138 150 ntBASIC1□□□□□ -2.25
LIMK1P53667 SNORA75.3-201ENST00000391231 150 ntBASIC1□□□□□ -2.25
LIMK1P53667 U8.17-201ENST00000391292 132 ntBASIC1□□□□□ -2.25
LIMK1P53667 MTCYBP6-201ENST00000441810 138 ntBASIC1□□□□□ -2.25
LIMK1P53667 MTND5P22-201ENST00000458380 195 ntBASIC1□□□□□ -2.25
LIMK1P53667 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1□□□□□ -2.25
LIMK1P53667 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1□□□□□ -2.25
LIMK1P53667 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1□□□□□ -2.25
LIMK1P53667 snoU18.1-201ENST00000629629 71 ntBASIC1□□□□□ -2.25
LIMK1P53667 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LIMK1P53667 Y_RNA.433-201ENST00000384089 102 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 MIR570-201ENST00000384917 97 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 RNA5SP496-201ENST00000391240 109 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMK1P53667 snoU13.25-201ENST00000458945 104 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 RPS26P48-201ENST00000491713 339 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 SERF1AP1-201ENST00000514575 187 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 RN7SKP164-201ENST00000516138 266 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 RNU6-1338P-201ENST00000516328 91 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 RNU7-181P-201ENST00000517234 74 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 DEFB108E-201ENST00000524692 240 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 uc_338.4-201ENST00000616635 176 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 MIR4251-201ENST00000635819 61 ntBASIC0.99□□□□□ -2.25
LIMK1P53667 RNU6-238P-201ENST00000363313 106 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 SNORA1.2-201ENST00000365189 134 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 SNORD28B-201ENST00000390993 75 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 AL603910.2-201ENST00000407268 136 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
LIMK1P53667 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 RNU6-830P-201ENST00000516353 107 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 RNU7-149P-201ENST00000516739 59 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
LIMK1P53667 Y_RNA.370-201ENST00000365589 108 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 RNU2-64P-201ENST00000411315 191 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 SNRPGP14-201ENST00000435400 219 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 SCARNA8-201ENST00000515924 131 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 RNU6-635P-201ENST00000516651 102 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 AP003072.1-201ENST00000531740 145 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.97□□□□□ -2.25
LIMK1P53667 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
LIMK1P53667 AC006504.6-201ENST00000590142 199 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 AC006441.5-201ENST00000612680 209 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 Y_RNA.802-201ENST00000614892 130 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 SEPT14P17-201ENST00000617978 177 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 MIR924-201ENST00000638017 53 ntBASIC0.97□□□□□ -2.25
LIMK1P53667 Y_RNA.115-201ENST00000363272 98 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 Y_RNA.587-201ENST00000391210 103 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 RNU6-1203P-201ENST00000410703 110 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 AC107297.1-201ENST00000459991 176 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 TRBVB-201ENST00000477100 408 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.96□□□□□ -2.26
LIMK1P53667 MIR6513-201ENST00000621188 64 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 U6.104-201ENST00000637979 90 ntBASIC0.96□□□□□ -2.26
LIMK1P53667 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
LIMK1P53667 Y_RNA.217-201ENST00000364214 105 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 RNU4-10P-201ENST00000364383 140 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 SNORA51.10-201ENST00000384418 136 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 RNU6-1289P-201ENST00000384431 106 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 RNU6-1109P-201ENST00000391187 107 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 Y_RNA.641-201ENST00000459414 105 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LIMK1P53667 AL008718.3-201ENST00000610217 321 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 AC022140.2-201ENST00000623500 188 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 AC010487.4-201ENST00000637027 61 ntBASIC0.95□□□□□ -2.26
LIMK1P53667 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
LIMK1P53667 Y_RNA.24-201ENST00000362508 103 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 SNORA63-201ENST00000363450 132 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 RNU6-211P-201ENST00000384047 107 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 SNORA8.3-201ENST00000384679 139 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 MIR1185-1-201ENST00000408598 86 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 MTATP8P1-201ENST00000467115 207 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 AC012433.1-201ENST00000588916 398 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 AC108706.1-201ENST00000611053 297 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.94□□□□□ -2.26
LIMK1P53667 MIR1302-6-201ENST00000408466 90 ntBASIC0.93□□□□□ -2.26
LIMK1P53667 RNU6-847P-201ENST00000411115 108 ntBASIC0.93□□□□□ -2.26
LIMK1P53667 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.93□□□□□ -2.26
LIMK1P53667 AC004941.2-201ENST00000427009 228 ntBASIC0.93□□□□□ -2.26
LIMK1P53667 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
LIMK1P53667 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
LIMK1P53667 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LIMK1P53667 UBE2WP1-201ENST00000362030 340 ntBASIC0.92□□□□□ -2.26
LIMK1P53667 Y_RNA.44-201ENST00000362676 108 ntBASIC0.92□□□□□ -2.26
LIMK1P53667 Y_RNA.85-201ENST00000363014 111 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms