Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC074198.2-201ENST00000508153 258 ntBASIC1.74□□□□□ -2.13
COPAP53621 RNU6-504P-201ENST00000516568 104 ntBASIC1.74□□□□□ -2.13
COPAP53621 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
COPAP53621 Y_RNA.91-201ENST00000363042 107 ntBASIC1.73□□□□□ -2.13
COPAP53621 RNU6-268P-201ENST00000364174 107 ntBASIC1.73□□□□□ -2.13
COPAP53621 SNRPGP13-201ENST00000442212 177 ntBASIC1.73□□□□□ -2.13
COPAP53621 AC079140.2-201ENST00000506193 142 ntBASIC1.73□□□□□ -2.13
COPAP53621 MIR4303-201ENST00000581299 66 ntBASIC1.73□□□□□ -2.13
COPAP53621 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
COPAP53621 AC006441.5-201ENST00000612680 209 ntBASIC1.73□□□□□ -2.13
COPAP53621 Y_RNA.180-201ENST00000363867 113 ntBASIC1.72□□□□□ -2.13
COPAP53621 SNORD1A-201ENST00000364968 72 ntBASIC1.72□□□□□ -2.13
COPAP53621 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.72□□□□□ -2.13
COPAP53621 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
COPAP53621 BTF3P4-201ENST00000418852 495 ntBASIC1.72□□□□□ -2.13
COPAP53621 AC015922.2-201ENST00000435593 184 ntBASIC1.72□□□□□ -2.13
COPAP53621 Y_RNA.666-201ENST00000516187 112 ntBASIC1.72□□□□□ -2.13
COPAP53621 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
COPAP53621 MIR378D2-201ENST00000580636 98 ntBASIC1.72□□□□□ -2.13
COPAP53621 AC097639.2-201ENST00000603159 172 ntBASIC1.72□□□□□ -2.13
COPAP53621 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
COPAP53621 SNORD24-201ENST00000383884 75 ntBASIC1.71□□□□□ -2.14
COPAP53621 Y_RNA.441-201ENST00000384123 112 ntBASIC1.71□□□□□ -2.14
COPAP53621 Y_RNA.521-201ENST00000384560 114 ntBASIC1.71□□□□□ -2.14
COPAP53621 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
COPAP53621 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
COPAP53621 PCNPP3-201ENST00000393579 471 ntBASIC1.71□□□□□ -2.14
COPAP53621 RNU5E-9P-201ENST00000411164 104 ntBASIC1.71□□□□□ -2.14
COPAP53621 SNRPGP14-201ENST00000435400 219 ntBASIC1.71□□□□□ -2.14
COPAP53621 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
COPAP53621 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.71□□□□□ -2.14
COPAP53621 MIR3937-201ENST00000580135 106 ntBASIC1.71□□□□□ -2.14
COPAP53621 snoU13.31-201ENST00000607291 104 ntBASIC1.71□□□□□ -2.14
COPAP53621 AL365434.2-201ENST00000607979 234 ntBASIC1.71□□□□□ -2.14
COPAP53621 AC015726.2-201ENST00000620112 122 ntBASIC1.71□□□□□ -2.14
COPAP53621 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.71□□□□□ -2.14
COPAP53621 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.71□□□□□ -2.14
COPAP53621 MIR378A-201ENST00000362177 66 ntBASIC1.7□□□□□ -2.14
COPAP53621 MIR302D-201ENST00000362275 68 ntBASIC1.7□□□□□ -2.14
COPAP53621 Y_RNA.4-201ENST00000362333 112 ntBASIC1.7□□□□□ -2.14
COPAP53621 SNORD33-201ENST00000362761 85 ntBASIC1.7□□□□□ -2.14
COPAP53621 RNU4-84P-201ENST00000364200 139 ntBASIC1.7□□□□□ -2.14
COPAP53621 Y_RNA.337-201ENST00000365312 102 ntBASIC1.7□□□□□ -2.14
COPAP53621 MIR516B2-201ENST00000385190 85 ntBASIC1.7□□□□□ -2.14
COPAP53621 MIR136-201ENST00000385207 82 ntBASIC1.7□□□□□ -2.14
COPAP53621 RNU6-239P-201ENST00000390990 99 ntBASIC1.7□□□□□ -2.14
COPAP53621 MIR548O-201ENST00000408583 114 ntBASIC1.7□□□□□ -2.14
COPAP53621 AC092991.1-201ENST00000477176 376 ntBASIC1.7□□□□□ -2.14
COPAP53621 AC108729.3-201ENST00000513484 108 ntBASIC1.7□□□□□ -2.14
COPAP53621 RNU6-693P-201ENST00000516134 107 ntBASIC1.7□□□□□ -2.14
COPAP53621 SNORD116-25-201ENST00000516517 92 ntBASIC1.7□□□□□ -2.14
COPAP53621 AC090142.3-201ENST00000519012 385 ntBASIC1.7□□□□□ -2.14
COPAP53621 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
COPAP53621 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
COPAP53621 Y_RNA.272-201ENST00000364696 102 ntBASIC1.69□□□□□ -2.14
COPAP53621 MIR526A1-201ENST00000384897 85 ntBASIC1.69□□□□□ -2.14
COPAP53621 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COPAP53621 MIR548I3-201ENST00000408378 149 ntBASIC1.69□□□□□ -2.14
COPAP53621 MIR548I1-201ENST00000408810 149 ntBASIC1.69□□□□□ -2.14
COPAP53621 RNU6-1135P-201ENST00000411083 103 ntBASIC1.69□□□□□ -2.14
COPAP53621 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
COPAP53621 RNU6-322P-201ENST00000516010 103 ntBASIC1.69□□□□□ -2.14
COPAP53621 RNU6-1270P-201ENST00000517128 108 ntBASIC1.69□□□□□ -2.14
COPAP53621 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COPAP53621 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COPAP53621 Y_RNA.66-201ENST00000362862 102 ntBASIC1.68□□□□□ -2.14
COPAP53621 RNU6-888P-201ENST00000363010 101 ntBASIC1.68□□□□□ -2.14
COPAP53621 SNORA2.2-201ENST00000365473 135 ntBASIC1.68□□□□□ -2.14
COPAP53621 SNORD61-201ENST00000384252 73 ntBASIC1.68□□□□□ -2.14
COPAP53621 RNU6-1065P-201ENST00000384513 106 ntBASIC1.68□□□□□ -2.14
COPAP53621 SNX2P2-201ENST00000424553 323 ntBASIC1.68□□□□□ -2.14
COPAP53621 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
COPAP53621 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
COPAP53621 RNU7-25P-201ENST00000516544 62 ntBASIC1.68□□□□□ -2.14
COPAP53621 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
COPAP53621 AC104465.1-201ENST00000611365 139 ntBASIC1.68□□□□□ -2.14
COPAP53621 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COPAP53621 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COPAP53621 Y_RNA.464-201ENST00000384282 110 ntBASIC1.67□□□□□ -2.14
COPAP53621 AL451046.2-201ENST00000403074 277 ntBASIC1.67□□□□□ -2.14
COPAP53621 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.67□□□□□ -2.14
COPAP53621 RNA5SP445-201ENST00000515889 115 ntBASIC1.67□□□□□ -2.14
COPAP53621 RNU6-1053P-201ENST00000515930 101 ntBASIC1.67□□□□□ -2.14
COPAP53621 RNU6-922P-201ENST00000516753 99 ntBASIC1.67□□□□□ -2.14
COPAP53621 AC090049.2-201ENST00000550377 109 ntBASIC1.67□□□□□ -2.14
COPAP53621 Y_RNA.164-201ENST00000363709 102 ntBASIC1.66□□□□□ -2.14
COPAP53621 SNORA25.7-201ENST00000364375 127 ntBASIC1.66□□□□□ -2.14
COPAP53621 Y_RNA.393-201ENST00000383936 102 ntBASIC1.66□□□□□ -2.14
COPAP53621 Y_RNA.547-201ENST00000384654 119 ntBASIC1.66□□□□□ -2.14
COPAP53621 MIR653-201ENST00000385279 96 ntBASIC1.66□□□□□ -2.14
COPAP53621 AC027119.1-201ENST00000440877 241 ntBASIC1.66□□□□□ -2.14
COPAP53621 RPS29P23-201ENST00000458635 123 ntBASIC1.66□□□□□ -2.14
COPAP53621 RNU6-830P-201ENST00000516353 107 ntBASIC1.66□□□□□ -2.14
COPAP53621 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COPAP53621 Y_RNA.8-201ENST00000362353 102 ntBASIC1.65□□□□□ -2.15
COPAP53621 SNORD115-28-201ENST00000363931 81 ntBASIC1.65□□□□□ -2.15
COPAP53621 RNU6-449P-201ENST00000383914 107 ntBASIC1.65□□□□□ -2.15
COPAP53621 RNU6-394P-201ENST00000410735 107 ntBASIC1.65□□□□□ -2.15
COPAP53621 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
COPAP53621 MIR3144-201ENST00000579460 79 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms