Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PIGPP3-201ENST00000425307 415 ntBASIC1.24□□□□□ -2.21
LBX1P52954 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
LBX1P52954 SCARNA24.2-201ENST00000516968 130 ntBASIC1.24□□□□□ -2.21
LBX1P52954 MIR4643-201ENST00000577473 78 ntBASIC1.24□□□□□ -2.21
LBX1P52954 MIR3937-201ENST00000580135 106 ntBASIC1.24□□□□□ -2.21
LBX1P52954 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LBX1P52954 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
LBX1P52954 MIR330-201ENST00000362196 94 ntBASIC1.23□□□□□ -2.21
LBX1P52954 RNU6-1205P-201ENST00000363625 106 ntBASIC1.23□□□□□ -2.21
LBX1P52954 SNORA2.2-201ENST00000365473 135 ntBASIC1.23□□□□□ -2.21
LBX1P52954 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
LBX1P52954 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
LBX1P52954 RNU6-131P-201ENST00000391144 107 ntBASIC1.23□□□□□ -2.21
LBX1P52954 Y_RNA.621-201ENST00000411065 96 ntBASIC1.23□□□□□ -2.21
LBX1P52954 HMGN2P32-201ENST00000444648 269 ntBASIC1.23□□□□□ -2.21
LBX1P52954 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
LBX1P52954 RNU7-12P-201ENST00000516030 62 ntBASIC1.23□□□□□ -2.21
LBX1P52954 SNORD45.4-201ENST00000516629 73 ntBASIC1.23□□□□□ -2.21
LBX1P52954 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
LBX1P52954 U6.104-201ENST00000637979 90 ntBASIC1.23□□□□□ -2.21
LBX1P52954 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LBX1P52954 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LBX1P52954 Y_RNA.14-201ENST00000362415 103 ntBASIC1.22□□□□□ -2.21
LBX1P52954 Y_RNA.304-201ENST00000365011 112 ntBASIC1.22□□□□□ -2.21
LBX1P52954 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
LBX1P52954 SNX2P2-201ENST00000424553 323 ntBASIC1.22□□□□□ -2.21
LBX1P52954 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
LBX1P52954 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
LBX1P52954 AC090142.3-201ENST00000519012 385 ntBASIC1.22□□□□□ -2.21
LBX1P52954 AL162730.1-201ENST00000605734 292 ntBASIC1.22□□□□□ -2.21
LBX1P52954 AC106754.2-201ENST00000623006 233 ntBASIC1.22□□□□□ -2.21
LBX1P52954 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
LBX1P52954 Y_RNA.60-201ENST00000362831 98 ntBASIC1.21□□□□□ -2.22
LBX1P52954 Y_RNA.288-201ENST00000364854 92 ntBASIC1.21□□□□□ -2.22
LBX1P52954 snoU2-30.1-201ENST00000365012 70 ntBASIC1.21□□□□□ -2.22
LBX1P52954 RNU6-163P-201ENST00000384396 106 ntBASIC1.21□□□□□ -2.22
LBX1P52954 RNU6-1065P-201ENST00000384513 106 ntBASIC1.21□□□□□ -2.22
LBX1P52954 MIR1298-201ENST00000408783 112 ntBASIC1.21□□□□□ -2.22
LBX1P52954 RNU6-383P-201ENST00000410864 94 ntBASIC1.21□□□□□ -2.22
LBX1P52954 RPL23AP91-201ENST00000569211 455 ntBASIC1.21□□□□□ -2.22
LBX1P52954 MIR4503-201ENST00000582187 83 ntBASIC1.21□□□□□ -2.22
LBX1P52954 MIR6857-201ENST00000613267 93 ntBASIC1.21□□□□□ -2.22
LBX1P52954 AL121890.5-201ENST00000620848 304 ntBASIC1.21□□□□□ -2.22
LBX1P52954 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LBX1P52954 RNU6-653P-201ENST00000363074 106 ntBASIC1.2□□□□□ -2.22
LBX1P52954 Y_RNA.193-201ENST00000363979 102 ntBASIC1.2□□□□□ -2.22
LBX1P52954 RNU6-1138P-201ENST00000365359 106 ntBASIC1.2□□□□□ -2.22
LBX1P52954 VTRNA1-3-201ENST00000365645 89 ntBASIC1.2□□□□□ -2.22
LBX1P52954 Y_RNA.452-201ENST00000384202 108 ntBASIC1.2□□□□□ -2.22
LBX1P52954 Y_RNA.539-201ENST00000384635 107 ntBASIC1.2□□□□□ -2.22
LBX1P52954 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LBX1P52954 SNORD72-201ENST00000390994 80 ntBASIC1.2□□□□□ -2.22
LBX1P52954 RNA5SP496-201ENST00000391240 109 ntBASIC1.2□□□□□ -2.22
LBX1P52954 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
LBX1P52954 snoU13.25-201ENST00000458945 104 ntBASIC1.2□□□□□ -2.22
LBX1P52954 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.2□□□□□ -2.22
LBX1P52954 SNORD77.4-201ENST00000516158 81 ntBASIC1.2□□□□□ -2.22
LBX1P52954 RNU6-830P-201ENST00000516353 107 ntBASIC1.2□□□□□ -2.22
LBX1P52954 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
LBX1P52954 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
LBX1P52954 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
LBX1P52954 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.2□□□□□ -2.22
LBX1P52954 AC006441.5-201ENST00000612680 209 ntBASIC1.2□□□□□ -2.22
LBX1P52954 JPX_2.1-201ENST00000614161 69 ntBASIC1.2□□□□□ -2.22
LBX1P52954 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LBX1P52954 Y_RNA.20-201ENST00000362479 113 ntBASIC1.19□□□□□ -2.22
LBX1P52954 Y_RNA.76-201ENST00000362931 109 ntBASIC1.19□□□□□ -2.22
LBX1P52954 Y_RNA.280-201ENST00000364765 112 ntBASIC1.19□□□□□ -2.22
LBX1P52954 Y_RNA.416-201ENST00000384014 113 ntBASIC1.19□□□□□ -2.22
LBX1P52954 MIR626-201ENST00000385032 94 ntBASIC1.19□□□□□ -2.22
LBX1P52954 MIR548H3-201ENST00000408771 118 ntBASIC1.19□□□□□ -2.22
LBX1P52954 Y_RNA.680-201ENST00000516441 93 ntBASIC1.19□□□□□ -2.22
LBX1P52954 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
LBX1P52954 RNU6-268P-201ENST00000364174 107 ntBASIC1.18□□□□□ -2.22
LBX1P52954 RNU11-2P-201ENST00000516898 142 ntBASIC1.18□□□□□ -2.22
LBX1P52954 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.18□□□□□ -2.22
LBX1P52954 MIR4724-201ENST00000579485 89 ntBASIC1.18□□□□□ -2.22
LBX1P52954 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
LBX1P52954 Y_RNA.802-201ENST00000614892 130 ntBASIC1.18□□□□□ -2.22
LBX1P52954 uc_338.4-201ENST00000616635 176 ntBASIC1.18□□□□□ -2.22
LBX1P52954 U4.1-201ENST00000620349 87 ntBASIC1.18□□□□□ -2.22
LBX1P52954 Y_RNA.144-201ENST00000363521 113 ntBASIC1.17□□□□□ -2.22
LBX1P52954 Y_RNA.229-201ENST00000364347 113 ntBASIC1.17□□□□□ -2.22
LBX1P52954 RNU4-10P-201ENST00000364383 140 ntBASIC1.17□□□□□ -2.22
LBX1P52954 RNU6-463P-201ENST00000384340 107 ntBASIC1.17□□□□□ -2.22
LBX1P52954 Y_RNA.549-201ENST00000384657 102 ntBASIC1.17□□□□□ -2.22
LBX1P52954 MIR532-201ENST00000385025 91 ntBASIC1.17□□□□□ -2.22
LBX1P52954 MIR15B-201ENST00000385045 98 ntBASIC1.17□□□□□ -2.22
LBX1P52954 RNU6-381P-201ENST00000391259 108 ntBASIC1.17□□□□□ -2.22
LBX1P52954 MIR1302-3-201ENST00000408128 138 ntBASIC1.17□□□□□ -2.22
LBX1P52954 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
LBX1P52954 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.17□□□□□ -2.22
LBX1P52954 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
LBX1P52954 Y_RNA.714-201ENST00000517065 90 ntBASIC1.17□□□□□ -2.22
LBX1P52954 AP003716.2-201ENST00000528260 108 ntBASIC1.17□□□□□ -2.22
LBX1P52954 AC097639.2-201ENST00000603159 172 ntBASIC1.17□□□□□ -2.22
LBX1P52954 AC062037.2-201ENST00000610137 73 ntBASIC1.17□□□□□ -2.22
LBX1P52954 7SK.10-201ENST00000621414 298 ntBASIC1.17□□□□□ -2.22
LBX1P52954 MIR367-201ENST00000362299 68 ntBASIC1.16□□□□□ -2.22
LBX1P52954 snoU2_19.4-201ENST00000364329 80 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms