Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNORD77.4-201ENST00000516158 81 ntBASIC1.19□□□□□ -2.22
PDX1P52945 MIR3192-201ENST00000584920 77 ntBASIC1.19□□□□□ -2.22
PDX1P52945 AC015726.2-201ENST00000620112 122 ntBASIC1.19□□□□□ -2.22
PDX1P52945 U4.1-201ENST00000620349 87 ntBASIC1.19□□□□□ -2.22
PDX1P52945 AL365265.1-201ENST00000621045 234 ntBASIC1.19□□□□□ -2.22
PDX1P52945 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
PDX1P52945 Y_RNA.60-201ENST00000362831 98 ntBASIC1.18□□□□□ -2.22
PDX1P52945 RNU6-653P-201ENST00000363074 106 ntBASIC1.18□□□□□ -2.22
PDX1P52945 RNU6-702P-201ENST00000364982 107 ntBASIC1.18□□□□□ -2.22
PDX1P52945 Y_RNA.350-201ENST00000365409 98 ntBASIC1.18□□□□□ -2.22
PDX1P52945 Y_RNA.452-201ENST00000384202 108 ntBASIC1.18□□□□□ -2.22
PDX1P52945 Y_RNA.466-201ENST00000384294 113 ntBASIC1.18□□□□□ -2.22
PDX1P52945 SNORD123-201ENST00000459473 70 ntBASIC1.18□□□□□ -2.22
PDX1P52945 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
PDX1P52945 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
PDX1P52945 RN7SKP164-201ENST00000516138 266 ntBASIC1.18□□□□□ -2.22
PDX1P52945 SNORA74.3-201ENST00000517108 154 ntBASIC1.18□□□□□ -2.22
PDX1P52945 MIR3149-201ENST00000584629 83 ntBASIC1.18□□□□□ -2.22
PDX1P52945 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
PDX1P52945 AC062037.2-201ENST00000610137 73 ntBASIC1.18□□□□□ -2.22
PDX1P52945 AC006441.5-201ENST00000612680 209 ntBASIC1.18□□□□□ -2.22
PDX1P52945 AL442067.1-201ENST00000613261 223 ntBASIC1.18□□□□□ -2.22
PDX1P52945 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.18□□□□□ -2.22
PDX1P52945 7SK.10-201ENST00000621414 298 ntBASIC1.18□□□□□ -2.22
PDX1P52945 Y_RNA.307-201ENST00000365022 117 ntBASIC1.17□□□□□ -2.22
PDX1P52945 RNU6-1138P-201ENST00000365359 106 ntBASIC1.17□□□□□ -2.22
PDX1P52945 SNORD38C-201ENST00000384381 69 ntBASIC1.17□□□□□ -2.22
PDX1P52945 MT-TT-201ENST00000387460 66 ntBASIC1.17□□□□□ -2.22
PDX1P52945 SNORD28B-201ENST00000390993 75 ntBASIC1.17□□□□□ -2.22
PDX1P52945 Y_RNA.587-201ENST00000391210 103 ntBASIC1.17□□□□□ -2.22
PDX1P52945 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.17□□□□□ -2.22
PDX1P52945 RNU7-41P-201ENST00000515917 61 ntBASIC1.17□□□□□ -2.22
PDX1P52945 SCARNA8-201ENST00000515924 131 ntBASIC1.17□□□□□ -2.22
PDX1P52945 RNU7-25P-201ENST00000516544 62 ntBASIC1.17□□□□□ -2.22
PDX1P52945 RNU6-453P-201ENST00000516819 85 ntBASIC1.17□□□□□ -2.22
PDX1P52945 MIR3128-201ENST00000581957 66 ntBASIC1.17□□□□□ -2.22
PDX1P52945 RNU6-463P-201ENST00000384340 107 ntBASIC1.16□□□□□ -2.22
PDX1P52945 MIR15B-201ENST00000385045 98 ntBASIC1.16□□□□□ -2.22
PDX1P52945 RNU6-381P-201ENST00000391259 108 ntBASIC1.16□□□□□ -2.22
PDX1P52945 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
PDX1P52945 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
PDX1P52945 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
PDX1P52945 BX284668.6-201ENST00000606899 438 ntBASIC1.16□□□□□ -2.22
PDX1P52945 Pinc.1-201ENST00000616452 154 ntBASIC1.16□□□□□ -2.22
PDX1P52945 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
PDX1P52945 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
PDX1P52945 Y_RNA.292-201ENST00000364904 97 ntBASIC1.15□□□□□ -2.23
PDX1P52945 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
PDX1P52945 Y_RNA.486-201ENST00000384398 107 ntBASIC1.15□□□□□ -2.23
PDX1P52945 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
PDX1P52945 MIR548O-201ENST00000408583 114 ntBASIC1.15□□□□□ -2.23
PDX1P52945 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
PDX1P52945 RNU4-57P-201ENST00000515980 135 ntBASIC1.15□□□□□ -2.23
PDX1P52945 Y_RNA.666-201ENST00000516187 112 ntBASIC1.15□□□□□ -2.23
PDX1P52945 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
PDX1P52945 MIR5688-201ENST00000580619 83 ntBASIC1.15□□□□□ -2.23
PDX1P52945 MIR4764-201ENST00000580680 88 ntBASIC1.15□□□□□ -2.23
PDX1P52945 AL078603.1-201ENST00000603824 313 ntBASIC1.15□□□□□ -2.23
PDX1P52945 AC022709.1-201ENST00000615967 87 ntBASIC1.15□□□□□ -2.23
PDX1P52945 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.15□□□□□ -2.23
PDX1P52945 Y_RNA.20-201ENST00000362479 113 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RNU4-17P-201ENST00000365598 141 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RNU6-42P-201ENST00000384165 107 ntBASIC1.14□□□□□ -2.23
PDX1P52945 Y_RNA.447-201ENST00000384184 113 ntBASIC1.14□□□□□ -2.23
PDX1P52945 MIR520C-201ENST00000385005 87 ntBASIC1.14□□□□□ -2.23
PDX1P52945 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.14□□□□□ -2.23
PDX1P52945 AC023449.1-201ENST00000454464 154 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RPL39P39-201ENST00000455840 151 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RPS29P1-201ENST00000465274 159 ntBASIC1.14□□□□□ -2.23
PDX1P52945 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.14□□□□□ -2.23
PDX1P52945 RNA5SP220-201ENST00000516298 104 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RNY3P16-201ENST00000516338 101 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RNU6-830P-201ENST00000516353 107 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RNU6-1007P-201ENST00000516586 107 ntBASIC1.14□□□□□ -2.23
PDX1P52945 RNU7-181P-201ENST00000517234 74 ntBASIC1.14□□□□□ -2.23
PDX1P52945 AC007751.1-201ENST00000529260 376 ntBASIC1.14□□□□□ -2.23
PDX1P52945 MIR548AR-201ENST00000582191 57 ntBASIC1.14□□□□□ -2.23
PDX1P52945 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PDX1P52945 Y_RNA.65-201ENST00000362846 100 ntBASIC1.13□□□□□ -2.23
PDX1P52945 RNU6-484P-201ENST00000384016 107 ntBASIC1.13□□□□□ -2.23
PDX1P52945 MIR570-201ENST00000384917 97 ntBASIC1.13□□□□□ -2.23
PDX1P52945 MIR548A2-201ENST00000384956 97 ntBASIC1.13□□□□□ -2.23
PDX1P52945 SNORD58.1-201ENST00000391313 66 ntBASIC1.13□□□□□ -2.23
PDX1P52945 RNU6-1054P-201ENST00000411293 104 ntBASIC1.13□□□□□ -2.23
PDX1P52945 RNU7-43P-201ENST00000516554 64 ntBASIC1.13□□□□□ -2.23
PDX1P52945 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.13□□□□□ -2.23
PDX1P52945 AL391903.3-201ENST00000612158 163 ntBASIC1.13□□□□□ -2.23
PDX1P52945 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PDX1P52945 Y_RNA.91-201ENST00000363042 107 ntBASIC1.12□□□□□ -2.23
PDX1P52945 SNORA25.3-201ENST00000363205 127 ntBASIC1.12□□□□□ -2.23
PDX1P52945 Y_RNA.262-201ENST00000364641 102 ntBASIC1.12□□□□□ -2.23
PDX1P52945 RNY4P28-201ENST00000365281 93 ntBASIC1.12□□□□□ -2.23
PDX1P52945 Y_RNA.547-201ENST00000384654 119 ntBASIC1.12□□□□□ -2.23
PDX1P52945 MIR616-201ENST00000385293 97 ntBASIC1.12□□□□□ -2.23
PDX1P52945 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
PDX1P52945 snosnR66.1-201ENST00000391095 99 ntBASIC1.12□□□□□ -2.23
PDX1P52945 Y_RNA.622-201ENST00000411091 108 ntBASIC1.12□□□□□ -2.23
PDX1P52945 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
PDX1P52945 RNU6-1023P-201ENST00000516137 106 ntBASIC1.12□□□□□ -2.23
PDX1P52945 RNU6-111P-201ENST00000517179 105 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms