Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNU6-381P-201ENST00000391259 108 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 RNA5SP57-201ENST00000459463 123 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.18□□□□□ -2.22
HCFC1P51610 MIR4662B-201ENST00000579498 81 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 MIR4308-201ENST00000580634 81 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 AC087685.1-201ENST00000587507 141 ntBASIC1.18□□□□□ -2.22
HCFC1P51610 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 MIR676-201ENST00000390702 67 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 SNORD72-201ENST00000390994 80 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 RNA5SP212-201ENST00000391223 107 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 U8.16-201ENST00000391279 133 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 RNU6-1135P-201ENST00000411083 103 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 RNA5SP480-201ENST00000516840 109 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 AC004792.1-201ENST00000614523 137 ntBASIC1.17□□□□□ -2.22
HCFC1P51610 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-1123P-201ENST00000362347 106 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-597P-201ENST00000365620 102 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 MIR548O-201ENST00000408583 114 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 AC015922.2-201ENST00000435593 184 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 HMGN2P32-201ENST00000444648 269 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RPL23AP6-201ENST00000446637 472 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 SNORA18.4-201ENST00000516440 124 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HCFC1P51610 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HCFC1P51610 Y_RNA.29-201ENST00000362570 113 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 Y_RNA.229-201ENST00000364347 113 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-1138P-201ENST00000365359 106 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-163P-201ENST00000384396 106 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU7-12P-201ENST00000516030 62 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 SNORD77.4-201ENST00000516158 81 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-182P-201ENST00000516970 105 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-1270P-201ENST00000517128 108 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 AC022559.1-201ENST00000520905 205 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 AC008507.4-201ENST00000585464 127 ntBASIC1.16□□□□□ -2.22
HCFC1P51610 RNU6-1209P-201ENST00000363655 107 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 RNU1-93P-201ENST00000364704 169 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 RNU6-643P-201ENST00000384018 107 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 MIR526A1-201ENST00000384897 85 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 AL034345.1-201ENST00000407768 123 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 STAG3L5P-204ENST00000443759 179 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 RNU1-98P-201ENST00000458992 160 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 RNU7-25P-201ENST00000516544 62 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 Y_RNA.700-201ENST00000516806 100 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 MRPS18CP4-201ENST00000535821 231 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 SNORD3E-202ENST00000627253 216 ntBASIC1.15□□□□□ -2.22
HCFC1P51610 RNU6-1082P-201ENST00000364574 107 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 Y_RNA.515-201ENST00000384535 112 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 MIR548I3-201ENST00000408378 149 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 MIR548I1-201ENST00000408810 149 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 CALM2P4-201ENST00000430810 426 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 RNU6-365P-201ENST00000517113 106 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.15□□□□□ -2.23
HCFC1P51610 U6.106-201ENST00000636360 105 ntBASIC1.15□□□□□ -2.23
HCFC1P51610 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
HCFC1P51610 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.14□□□□□ -2.23
HCFC1P51610 Y_RNA.170-201ENST00000363746 110 ntBASIC1.14□□□□□ -2.23
HCFC1P51610 SNORD1A-201ENST00000364968 72 ntBASIC1.14□□□□□ -2.23
HCFC1P51610 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HCFC1P51610 RNU6-578P-201ENST00000390980 103 ntBASIC1.14□□□□□ -2.23
HCFC1P51610 AL451046.2-201ENST00000403074 277 ntBASIC1.14□□□□□ -2.23
HCFC1P51610 Y_RNA.797-201ENST00000515977 94 ntBASIC1.14□□□□□ -2.23
HCFC1P51610 AL357312.1-201ENST00000603879 298 ntBASIC1.14□□□□□ -2.23
HCFC1P51610 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HCFC1P51610 MIR424-201ENST00000362227 98 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 RNY1-201ENST00000364228 113 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 Y_RNA.336-201ENST00000365307 109 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 Y_RNA.572-201ENST00000384757 98 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 SNORA26-201ENST00000391286 122 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.13□□□□□ -2.23
HCFC1P51610 SNRPGP10-201ENST00000432323 225 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AC099513.1-201ENST00000490423 301 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AC090142.3-201ENST00000519012 385 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AC097639.2-201ENST00000603159 172 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HCFC1P51610 Y_RNA.91-201ENST00000363042 107 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 RNU4-84P-201ENST00000364200 139 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 Y_RNA.270-201ENST00000364693 104 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 Y_RNA.370-201ENST00000365589 108 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 MIR516B2-201ENST00000385190 85 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AL161935.2-201ENST00000414627 60 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 RNU7-120P-201ENST00000459334 63 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AC005908.1-201ENST00000468701 347 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.13□□□□□ -2.23
HCFC1P51610 FAM106DP-201ENST00000586416 501 ntBASIC1.13□□□□□ -2.23
HCFC1P51610 SNORD50B-201ENST00000364995 70 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 MIR136-201ENST00000385207 82 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 AC092991.1-201ENST00000477176 376 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 RNU6-1219P-201ENST00000516143 112 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 RNA5SP153-201ENST00000516498 76 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms