Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.36□□□□□ -2.03
MRE11P49959 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.36□□□□□ -2.03
MRE11P49959 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MRE11P49959 RNU6-235P-201ENST00000362644 107 ntBASIC2.35□□□□□ -2.03
MRE11P49959 Y_RNA.280-201ENST00000364765 112 ntBASIC2.35□□□□□ -2.03
MRE11P49959 SNORD24-201ENST00000383884 75 ntBASIC2.35□□□□□ -2.03
MRE11P49959 MIR17-201ENST00000385012 84 ntBASIC2.35□□□□□ -2.03
MRE11P49959 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.35□□□□□ -2.03
MRE11P49959 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.35□□□□□ -2.03
MRE11P49959 HMGN2P19-201ENST00000425149 265 ntBASIC2.35□□□□□ -2.03
MRE11P49959 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
MRE11P49959 AC055731.1-201ENST00000474387 401 ntBASIC2.35□□□□□ -2.03
MRE11P49959 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
MRE11P49959 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.35□□□□□ -2.03
MRE11P49959 Y_RNA.666-201ENST00000516187 112 ntBASIC2.35□□□□□ -2.03
MRE11P49959 Y_RNA.714-201ENST00000517065 90 ntBASIC2.35□□□□□ -2.03
MRE11P49959 MIR3121-201ENST00000579680 77 ntBASIC2.35□□□□□ -2.03
MRE11P49959 MIR3129-201ENST00000581095 76 ntBASIC2.35□□□□□ -2.03
MRE11P49959 BX248123.2-201ENST00000606318 124 ntBASIC2.35□□□□□ -2.03
MRE11P49959 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
MRE11P49959 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
MRE11P49959 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
MRE11P49959 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
MRE11P49959 Y_RNA.52-201ENST00000362760 96 ntBASIC2.34□□□□□ -2.03
MRE11P49959 RNU6-888P-201ENST00000363010 101 ntBASIC2.34□□□□□ -2.03
MRE11P49959 RNU6-457P-201ENST00000363999 107 ntBASIC2.34□□□□□ -2.03
MRE11P49959 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.03
MRE11P49959 MIR29C-201ENST00000385231 88 ntBASIC2.34□□□□□ -2.03
MRE11P49959 MIR891A-201ENST00000401237 79 ntBASIC2.34□□□□□ -2.03
MRE11P49959 AL603914.1-201ENST00000401964 204 ntBASIC2.34□□□□□ -2.03
MRE11P49959 AL158823.1-201ENST00000418441 478 ntBASIC2.34□□□□□ -2.03
MRE11P49959 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.34□□□□□ -2.03
MRE11P49959 Y_RNA.712-201ENST00000517011 92 ntBASIC2.34□□□□□ -2.03
MRE11P49959 RNU6-1270P-201ENST00000517128 108 ntBASIC2.34□□□□□ -2.03
MRE11P49959 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.34□□□□□ -2.03
MRE11P49959 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.34□□□□□ -2.03
MRE11P49959 AC245060.5-201ENST00000610778 3293 ntBASIC2.34□□□□□ -2.03
MRE11P49959 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MRE11P49959 SNORD68-201ENST00000363214 84 ntBASIC2.33□□□□□ -2.04
MRE11P49959 Y_RNA.242-201ENST00000364473 110 ntBASIC2.33□□□□□ -2.04
MRE11P49959 SNORD18B-201ENST00000365659 72 ntBASIC2.33□□□□□ -2.04
MRE11P49959 MIR548A2-201ENST00000384956 97 ntBASIC2.33□□□□□ -2.04
MRE11P49959 AP1B1P2-201ENST00000416196 106 ntBASIC2.33□□□□□ -2.04
MRE11P49959 BX510359.4-201ENST00000423750 193 ntBASIC2.33□□□□□ -2.04
MRE11P49959 AC245047.3-201ENST00000429428 127 ntBASIC2.33□□□□□ -2.04
MRE11P49959 AL158147.1-201ENST00000443970 75 ntBASIC2.33□□□□□ -2.04
MRE11P49959 Y_RNA.690-201ENST00000516603 95 ntBASIC2.33□□□□□ -2.04
MRE11P49959 MIR4762-201ENST00000585261 75 ntBASIC2.33□□□□□ -2.04
MRE11P49959 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
MRE11P49959 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.33□□□□□ -2.04
MRE11P49959 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MRE11P49959 RNU6-834P-201ENST00000362367 110 ntBASIC2.32□□□□□ -2.04
MRE11P49959 RNU6-508P-201ENST00000363231 103 ntBASIC2.32□□□□□ -2.04
MRE11P49959 Y_RNA.114-201ENST00000363265 113 ntBASIC2.32□□□□□ -2.04
MRE11P49959 U8.5-201ENST00000364528 136 ntBASIC2.32□□□□□ -2.04
MRE11P49959 RNU6-309P-201ENST00000364573 106 ntBASIC2.32□□□□□ -2.04
MRE11P49959 RNU6-1292P-201ENST00000383856 107 ntBASIC2.32□□□□□ -2.04
MRE11P49959 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
MRE11P49959 SNRPGP13-201ENST00000442212 177 ntBASIC2.32□□□□□ -2.04
MRE11P49959 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
MRE11P49959 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
MRE11P49959 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.32□□□□□ -2.04
MRE11P49959 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
MRE11P49959 Y_RNA.191-201ENST00000363972 113 ntBASIC2.31□□□□□ -2.04
MRE11P49959 RNA5SP109-201ENST00000391010 116 ntBASIC2.31□□□□□ -2.04
MRE11P49959 RNU6-772P-201ENST00000516042 105 ntBASIC2.31□□□□□ -2.04
MRE11P49959 RNU6-693P-201ENST00000516134 107 ntBASIC2.31□□□□□ -2.04
MRE11P49959 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRE11P49959 Y_RNA.36-201ENST00000362602 112 ntBASIC2.3□□□□□ -2.04
MRE11P49959 RNU6-1325P-201ENST00000364905 105 ntBASIC2.3□□□□□ -2.04
MRE11P49959 MIR518F-201ENST00000384973 87 ntBASIC2.3□□□□□ -2.04
MRE11P49959 MIR4287-201ENST00000579398 78 ntBASIC2.3□□□□□ -2.04
MRE11P49959 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.3□□□□□ -2.04
MRE11P49959 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
MRE11P49959 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MRE11P49959 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
MRE11P49959 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
MRE11P49959 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
MRE11P49959 RNU6-1056P-201ENST00000383996 107 ntBASIC2.29□□□□□ -2.04
MRE11P49959 MIR802-201ENST00000390235 94 ntBASIC2.29□□□□□ -2.04
MRE11P49959 SNORD77.3-201ENST00000391113 65 ntBASIC2.29□□□□□ -2.04
MRE11P49959 RNA5SP482-201ENST00000391269 118 ntBASIC2.29□□□□□ -2.04
MRE11P49959 HMGN2P39-201ENST00000398005 273 ntBASIC2.29□□□□□ -2.04
MRE11P49959 AL035461.1-201ENST00000421490 332 ntBASIC2.29□□□□□ -2.04
MRE11P49959 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.29□□□□□ -2.04
MRE11P49959 RNU6-919P-201ENST00000516731 104 ntBASIC2.29□□□□□ -2.04
MRE11P49959 AC084364.2-201ENST00000546924 395 ntBASIC2.29□□□□□ -2.04
MRE11P49959 MIR4452-201ENST00000583004 71 ntBASIC2.29□□□□□ -2.04
MRE11P49959 AC069114.2-201ENST00000604699 304 ntBASIC2.29□□□□□ -2.04
MRE11P49959 MIR3914-2-201ENST00000637339 95 ntBASIC2.29□□□□□ -2.04
MRE11P49959 RNU6-661P-201ENST00000362409 107 ntBASIC2.28□□□□□ -2.04
MRE11P49959 SNORD14E-201ENST00000364009 85 ntBASIC2.28□□□□□ -2.04
MRE11P49959 RNU6-1019P-201ENST00000364424 107 ntBASIC2.28□□□□□ -2.04
MRE11P49959 Y_RNA.265-201ENST00000364677 108 ntBASIC2.28□□□□□ -2.04
MRE11P49959 RNU6-442P-201ENST00000383968 104 ntBASIC2.28□□□□□ -2.04
MRE11P49959 MIR597-201ENST00000384968 97 ntBASIC2.28□□□□□ -2.04
MRE11P49959 SNORA40.5-201ENST00000391061 128 ntBASIC2.28□□□□□ -2.04
MRE11P49959 AL023284.1-201ENST00000403956 276 ntBASIC2.28□□□□□ -2.04
MRE11P49959 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
MRE11P49959 AF228730.3-201ENST00000436691 102 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms