Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PGBD4P5-201ENST00000445958 426 ntBASIC1.41□□□□□ -2.18
CLK1P49759 snoU13.23-201ENST00000458863 104 ntBASIC1.41□□□□□ -2.18
CLK1P49759 RNU6-346P-201ENST00000516288 111 ntBASIC1.41□□□□□ -2.18
CLK1P49759 RNA5SP153-201ENST00000516498 76 ntBASIC1.41□□□□□ -2.18
CLK1P49759 RNU7-28P-201ENST00000516759 62 ntBASIC1.41□□□□□ -2.18
CLK1P49759 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
CLK1P49759 AC087685.1-201ENST00000587507 141 ntBASIC1.41□□□□□ -2.18
CLK1P49759 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
CLK1P49759 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CLK1P49759 Y_RNA.66-201ENST00000362862 102 ntBASIC1.4□□□□□ -2.19
CLK1P49759 SNORD68-201ENST00000363214 84 ntBASIC1.4□□□□□ -2.19
CLK1P49759 Y_RNA.265-201ENST00000364677 108 ntBASIC1.4□□□□□ -2.19
CLK1P49759 Y_RNA.634-201ENST00000364811 113 ntBASIC1.4□□□□□ -2.19
CLK1P49759 RNU6-449P-201ENST00000383914 107 ntBASIC1.4□□□□□ -2.19
CLK1P49759 SNORA70.7-201ENST00000384159 133 ntBASIC1.4□□□□□ -2.19
CLK1P49759 RNU6-768P-201ENST00000384683 107 ntBASIC1.4□□□□□ -2.19
CLK1P49759 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
CLK1P49759 SNRPGP14-201ENST00000435400 219 ntBASIC1.4□□□□□ -2.19
CLK1P49759 RNU7-34P-201ENST00000459394 64 ntBASIC1.4□□□□□ -2.19
CLK1P49759 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.4□□□□□ -2.19
CLK1P49759 RNU6-1299P-201ENST00000516316 100 ntBASIC1.4□□□□□ -2.19
CLK1P49759 SNORD116-25-201ENST00000516517 92 ntBASIC1.4□□□□□ -2.19
CLK1P49759 Pinc.1-201ENST00000616452 154 ntBASIC1.4□□□□□ -2.19
CLK1P49759 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.4□□□□□ -2.19
CLK1P49759 RNY1P11-201ENST00000363759 113 ntBASIC1.39□□□□□ -2.19
CLK1P49759 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
CLK1P49759 RNU6-1031P-201ENST00000384773 107 ntBASIC1.39□□□□□ -2.19
CLK1P49759 RNU6-131P-201ENST00000391144 107 ntBASIC1.39□□□□□ -2.19
CLK1P49759 MLLT10P1-201ENST00000418346 262 ntBASIC1.39□□□□□ -2.19
CLK1P49759 CALM2P4-201ENST00000430810 426 ntBASIC1.39□□□□□ -2.19
CLK1P49759 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.39□□□□□ -2.19
CLK1P49759 RNU6-1116P-201ENST00000517269 99 ntBASIC1.39□□□□□ -2.19
CLK1P49759 AC007751.1-201ENST00000529260 376 ntBASIC1.39□□□□□ -2.19
CLK1P49759 CYP3A52P-201ENST00000563326 91 ntBASIC1.39□□□□□ -2.19
CLK1P49759 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.39□□□□□ -2.19
CLK1P49759 MIR4298-201ENST00000584380 73 ntBASIC1.39□□□□□ -2.19
CLK1P49759 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
CLK1P49759 Y_RNA.778-201ENST00000620203 90 ntBASIC1.39□□□□□ -2.19
CLK1P49759 MIR7843-201ENST00000622274 79 ntBASIC1.39□□□□□ -2.19
CLK1P49759 MTND1P7-201ENST00000632801 297 ntBASIC1.39□□□□□ -2.19
CLK1P49759 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLK1P49759 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLK1P49759 Y_RNA.337-201ENST00000365312 102 ntBASIC1.38□□□□□ -2.19
CLK1P49759 RNU6-597P-201ENST00000365620 102 ntBASIC1.38□□□□□ -2.19
CLK1P49759 Y_RNA.393-201ENST00000383936 102 ntBASIC1.38□□□□□ -2.19
CLK1P49759 Y_RNA.400-201ENST00000383963 111 ntBASIC1.38□□□□□ -2.19
CLK1P49759 RNU6-424P-201ENST00000384367 105 ntBASIC1.38□□□□□ -2.19
CLK1P49759 U8.16-201ENST00000391279 133 ntBASIC1.38□□□□□ -2.19
CLK1P49759 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
CLK1P49759 RN7SKP200-201ENST00000410564 320 ntBASIC1.38□□□□□ -2.19
CLK1P49759 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.38□□□□□ -2.19
CLK1P49759 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.38□□□□□ -2.19
CLK1P49759 AC023449.1-201ENST00000454464 154 ntBASIC1.38□□□□□ -2.19
CLK1P49759 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
CLK1P49759 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.38□□□□□ -2.19
CLK1P49759 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
CLK1P49759 MIR4662B-201ENST00000579498 81 ntBASIC1.38□□□□□ -2.19
CLK1P49759 MIR378D2-201ENST00000580636 98 ntBASIC1.38□□□□□ -2.19
CLK1P49759 DNAJC19P2-201ENST00000593340 302 ntBASIC1.38□□□□□ -2.19
CLK1P49759 AC120024.3-201ENST00000603167 156 ntBASIC1.38□□□□□ -2.19
CLK1P49759 SNORA28-201ENST00000606769 126 ntBASIC1.38□□□□□ -2.19
CLK1P49759 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
CLK1P49759 AC021506.2-201ENST00000612354 169 ntBASIC1.38□□□□□ -2.19
CLK1P49759 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
CLK1P49759 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
CLK1P49759 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
CLK1P49759 RNU6-151P-201ENST00000364158 107 ntBASIC1.37□□□□□ -2.19
CLK1P49759 MIR194-1-201ENST00000384892 85 ntBASIC1.37□□□□□ -2.19
CLK1P49759 MIR548A2-201ENST00000384956 97 ntBASIC1.37□□□□□ -2.19
CLK1P49759 MIR569-201ENST00000385228 96 ntBASIC1.37□□□□□ -2.19
CLK1P49759 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
CLK1P49759 RNU2-70P-201ENST00000410718 179 ntBASIC1.37□□□□□ -2.19
CLK1P49759 AL392103.1-201ENST00000447000 198 ntBASIC1.37□□□□□ -2.19
CLK1P49759 RNU7-197P-201ENST00000458836 62 ntBASIC1.37□□□□□ -2.19
CLK1P49759 AC114811.1-201ENST00000507207 168 ntBASIC1.37□□□□□ -2.19
CLK1P49759 SNORD45.4-201ENST00000516629 73 ntBASIC1.37□□□□□ -2.19
CLK1P49759 RNA5SP168-201ENST00000516642 112 ntBASIC1.37□□□□□ -2.19
CLK1P49759 RNU6-268P-201ENST00000364174 107 ntBASIC1.36□□□□□ -2.19
CLK1P49759 Y_RNA.215-201ENST00000364204 112 ntBASIC1.36□□□□□ -2.19
CLK1P49759 RNU6-1082P-201ENST00000364574 107 ntBASIC1.36□□□□□ -2.19
CLK1P49759 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
CLK1P49759 RNU4-11P-201ENST00000365287 132 ntBASIC1.36□□□□□ -2.19
CLK1P49759 RNU6-1336P-201ENST00000383886 109 ntBASIC1.36□□□□□ -2.19
CLK1P49759 SNORD61-201ENST00000384252 73 ntBASIC1.36□□□□□ -2.19
CLK1P49759 AL034345.1-201ENST00000407768 123 ntBASIC1.36□□□□□ -2.19
CLK1P49759 SNORA79-201ENST00000408376 140 ntBASIC1.36□□□□□ -2.19
CLK1P49759 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
CLK1P49759 CYCTP-201ENST00000504253 315 ntBASIC1.36□□□□□ -2.19
CLK1P49759 Y_RNA.666-201ENST00000516187 112 ntBASIC1.36□□□□□ -2.19
CLK1P49759 RNU6-126P-201ENST00000516685 103 ntBASIC1.36□□□□□ -2.19
CLK1P49759 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
CLK1P49759 AC015712.3-201ENST00000559380 164 ntBASIC1.36□□□□□ -2.19
CLK1P49759 AC006441.5-201ENST00000612680 209 ntBASIC1.36□□□□□ -2.19
CLK1P49759 AC027279.3-201ENST00000625055 122 ntBASIC1.36□□□□□ -2.19
CLK1P49759 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CLK1P49759 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
CLK1P49759 RNU6-888P-201ENST00000363010 101 ntBASIC1.35□□□□□ -2.19
CLK1P49759 snoU2-30.1-201ENST00000365012 70 ntBASIC1.35□□□□□ -2.19
CLK1P49759 RNA5SP259-201ENST00000365541 109 ntBASIC1.35□□□□□ -2.19
CLK1P49759 SNORD24-201ENST00000383884 75 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms