Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 RNU6-240P-201ENST00000516098 97 ntBASIC1.74□□□□□ -2.13
THBS3P49746 SNORD45.4-201ENST00000516629 73 ntBASIC1.74□□□□□ -2.13
THBS3P49746 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.74□□□□□ -2.13
THBS3P49746 MIR4679-2-201ENST00000578358 77 ntBASIC1.74□□□□□ -2.13
THBS3P49746 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.74□□□□□ -2.13
THBS3P49746 uc_338.28-201ENST00000612082 187 ntBASIC1.74□□□□□ -2.13
THBS3P49746 AL137067.1-201ENST00000615933 120 ntBASIC1.74□□□□□ -2.13
THBS3P49746 AC134878.1-201ENST00000619901 243 ntBASIC1.74□□□□□ -2.13
THBS3P49746 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.74□□□□□ -2.13
THBS3P49746 AC131280.1-202ENST00000624067 4211 ntBASIC1.74□□□□□ -2.13
THBS3P49746 MIR450A1-201ENST00000362262 91 ntBASIC1.73□□□□□ -2.13
THBS3P49746 Y_RNA.37-201ENST00000362606 108 ntBASIC1.73□□□□□ -2.13
THBS3P49746 SNORD115-28-201ENST00000363931 81 ntBASIC1.73□□□□□ -2.13
THBS3P49746 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
THBS3P49746 RNU6-1189P-201ENST00000383958 107 ntBASIC1.73□□□□□ -2.13
THBS3P49746 SNORA11.4-201ENST00000408823 129 ntBASIC1.73□□□□□ -2.13
THBS3P49746 RNA5SP89-201ENST00000410300 108 ntBASIC1.73□□□□□ -2.13
THBS3P49746 BX510359.4-201ENST00000423750 193 ntBASIC1.73□□□□□ -2.13
THBS3P49746 RNU6-113P-201ENST00000516653 101 ntBASIC1.73□□□□□ -2.13
THBS3P49746 SNORD36C-201ENST00000516733 66 ntBASIC1.73□□□□□ -2.13
THBS3P49746 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
THBS3P49746 RNU6-1116P-201ENST00000517269 99 ntBASIC1.73□□□□□ -2.13
THBS3P49746 AC026271.5-201ENST00000577873 130 ntBASIC1.73□□□□□ -2.13
THBS3P49746 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.73□□□□□ -2.13
THBS3P49746 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
THBS3P49746 AP006437.1-201ENST00000641440 3685 ntBASIC1.72□□□□□ -2.13
THBS3P49746 Y_RNA.116-201ENST00000363292 103 ntBASIC1.72□□□□□ -2.13
THBS3P49746 SNORA2.2-201ENST00000365473 135 ntBASIC1.72□□□□□ -2.13
THBS3P49746 Y_RNA.410-201ENST00000383992 113 ntBASIC1.72□□□□□ -2.13
THBS3P49746 RNA5SP482-201ENST00000391269 118 ntBASIC1.72□□□□□ -2.13
THBS3P49746 SNORD23.1-201ENST00000408212 104 ntBASIC1.72□□□□□ -2.13
THBS3P49746 RNU6-938P-201ENST00000411285 103 ntBASIC1.72□□□□□ -2.13
THBS3P49746 AL445646.1-201ENST00000431784 216 ntBASIC1.72□□□□□ -2.13
THBS3P49746 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
THBS3P49746 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.72□□□□□ -2.13
THBS3P49746 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.72□□□□□ -2.13
THBS3P49746 RNU6-168P-201ENST00000516189 101 ntBASIC1.72□□□□□ -2.13
THBS3P49746 RNA5SP170-201ENST00000517150 101 ntBASIC1.72□□□□□ -2.13
THBS3P49746 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
THBS3P49746 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
THBS3P49746 MIR7843-201ENST00000622274 79 ntBASIC1.72□□□□□ -2.13
THBS3P49746 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
THBS3P49746 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
THBS3P49746 RNU1-58P-201ENST00000362413 163 ntBASIC1.71□□□□□ -2.14
THBS3P49746 Y_RNA.43-201ENST00000362670 111 ntBASIC1.71□□□□□ -2.14
THBS3P49746 RNU1-148P-201ENST00000384472 162 ntBASIC1.71□□□□□ -2.14
THBS3P49746 Y_RNA.549-201ENST00000384657 102 ntBASIC1.71□□□□□ -2.14
THBS3P49746 MIR570-201ENST00000384917 97 ntBASIC1.71□□□□□ -2.14
THBS3P49746 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
THBS3P49746 RNA5SP136-201ENST00000410906 107 ntBASIC1.71□□□□□ -2.14
THBS3P49746 RPS26P48-201ENST00000491713 339 ntBASIC1.71□□□□□ -2.14
THBS3P49746 SNORA31.10-201ENST00000516482 106 ntBASIC1.71□□□□□ -2.14
THBS3P49746 AC084364.2-201ENST00000546924 395 ntBASIC1.71□□□□□ -2.14
THBS3P49746 AC007012.1-201ENST00000567192 175 ntBASIC1.71□□□□□ -2.14
THBS3P49746 MIR5002-201ENST00000584713 97 ntBASIC1.71□□□□□ -2.14
THBS3P49746 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.71□□□□□ -2.14
THBS3P49746 AC015726.2-201ENST00000620112 122 ntBASIC1.71□□□□□ -2.14
THBS3P49746 MIR8054-201ENST00000620877 86 ntBASIC1.71□□□□□ -2.14
THBS3P49746 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
THBS3P49746 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
THBS3P49746 SNORD114-1-201ENST00000362705 72 ntBASIC1.7□□□□□ -2.14
THBS3P49746 Y_RNA.281-201ENST00000364774 94 ntBASIC1.7□□□□□ -2.14
THBS3P49746 RNU6-1107P-201ENST00000364817 104 ntBASIC1.7□□□□□ -2.14
THBS3P49746 RNA5SP160-201ENST00000364866 120 ntBASIC1.7□□□□□ -2.14
THBS3P49746 Y_RNA.336-201ENST00000365307 109 ntBASIC1.7□□□□□ -2.14
THBS3P49746 Y_RNA.440-201ENST00000384120 114 ntBASIC1.7□□□□□ -2.14
THBS3P49746 MIR597-201ENST00000384968 97 ntBASIC1.7□□□□□ -2.14
THBS3P49746 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
THBS3P49746 COX6CP6-201ENST00000490840 228 ntBASIC1.7□□□□□ -2.14
THBS3P49746 AC114811.1-201ENST00000507207 168 ntBASIC1.7□□□□□ -2.14
THBS3P49746 RNU7-193P-201ENST00000516723 65 ntBASIC1.7□□□□□ -2.14
THBS3P49746 RNU7-28P-201ENST00000516759 62 ntBASIC1.7□□□□□ -2.14
THBS3P49746 MIR5094-201ENST00000578766 85 ntBASIC1.7□□□□□ -2.14
THBS3P49746 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
THBS3P49746 AC005786.1-201ENST00000588553 154 ntBASIC1.7□□□□□ -2.14
THBS3P49746 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
THBS3P49746 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.7□□□□□ -2.14
THBS3P49746 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
THBS3P49746 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
THBS3P49746 MIRLET7C-201ENST00000362160 84 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNU6-349P-201ENST00000362402 107 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNA5SP432-201ENST00000362480 116 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNU6-1255P-201ENST00000363434 112 ntBASIC1.69□□□□□ -2.14
THBS3P49746 SNORA16B-201ENST00000364674 135 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNU6-690P-201ENST00000365242 106 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNU6-106P-201ENST00000384405 107 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNU6-554P-201ENST00000410466 106 ntBASIC1.69□□□□□ -2.14
THBS3P49746 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.69□□□□□ -2.14
THBS3P49746 AL031737.1-201ENST00000450125 223 ntBASIC1.69□□□□□ -2.14
THBS3P49746 RNY4P20-201ENST00000516678 93 ntBASIC1.69□□□□□ -2.14
THBS3P49746 AP003484.1-201ENST00000530974 250 ntBASIC1.69□□□□□ -2.14
THBS3P49746 MIR3126-201ENST00000577443 74 ntBASIC1.69□□□□□ -2.14
THBS3P49746 AL035470.1-201ENST00000622571 220 ntBASIC1.69□□□□□ -2.14
THBS3P49746 MIR219B-201ENST00000637023 88 ntBASIC1.69□□□□□ -2.14
THBS3P49746 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.68□□□□□ -2.14
THBS3P49746 Y_RNA.85-201ENST00000363014 111 ntBASIC1.68□□□□□ -2.14
THBS3P49746 RNU6-1019P-201ENST00000364424 107 ntBASIC1.68□□□□□ -2.14
THBS3P49746 RNU6-163P-201ENST00000384396 106 ntBASIC1.68□□□□□ -2.14
THBS3P49746 Y_RNA.495-201ENST00000384435 112 ntBASIC1.68□□□□□ -2.14
THBS3P49746 SNORA64-201ENST00000384674 134 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms