Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-54P-201ENST00000365563 107 ntBASIC-1.22□□□□□ -2.61
HTTP42858 RNU6-291P-201ENST00000384720 107 ntBASIC-1.22□□□□□ -2.61
HTTP42858 MIR190B-201ENST00000401119 79 ntBASIC-1.22□□□□□ -2.61
HTTP42858 AL078595.1-201ENST00000404458 226 ntBASIC-1.22□□□□□ -2.61
HTTP42858 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.22□□□□□ -2.61
HTTP42858 MTND2P20-201ENST00000440805 661 ntBASIC-1.22□□□□□ -2.61
HTTP42858 AL137792.2-201ENST00000443484 235 ntBASIC-1.22□□□□□ -2.61
HTTP42858 TPTE2P5-203ENST00000458118 728 ntBASIC-1.22□□□□□ -2.61
HTTP42858 AC026741.1-201ENST00000605892 482 ntBASIC-1.22□□□□□ -2.61
HTTP42858 RMST_3.1-201ENST00000611651 109 ntBASIC-1.22□□□□□ -2.61
HTTP42858 AP001282.2-201ENST00000616149 309 ntBASIC-1.22□□□□□ -2.61
HTTP42858 RNU6-117P-201ENST00000365415 107 ntBASIC-1.23□□□□□ -2.61
HTTP42858 MIR539-201ENST00000365690 78 ntBASIC-1.23□□□□□ -2.61
HTTP42858 RNA5SP86-201ENST00000390869 98 ntBASIC-1.23□□□□□ -2.61
HTTP42858 AL121757.2-201ENST00000611223 313 ntBASIC-1.23□□□□□ -2.61
HTTP42858 MTCO2P27-201ENST00000420740 428 ntBASIC-1.23□□□□□ -2.61
HTTP42858 MTATP6P13-201ENST00000438531 667 ntBASIC-1.23□□□□□ -2.61
HTTP42858 AC097510.1-201ENST00000510945 133 ntBASIC-1.23□□□□□ -2.61
HTTP42858 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.23□□□□□ -2.61
HTTP42858 AC107934.1-201ENST00000522215 217 ntBASIC-1.23□□□□□ -2.61
HTTP42858 MIR466-201ENST00000580653 84 ntBASIC-1.23□□□□□ -2.61
HTTP42858 AC005972.2-201ENST00000604690 348 ntBASIC-1.23□□□□□ -2.61
HTTP42858 TUSC7.1-201ENST00000610969 165 ntBASIC-1.23□□□□□ -2.61
HTTP42858 AC027807.2-201ENST00000616099 408 ntBASIC-1.23□□□□□ -2.61
HTTP42858 RNU6-128P-201ENST00000383976 107 ntBASIC-1.24□□□□□ -2.61
HTTP42858 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.24□□□□□ -2.61
HTTP42858 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.24□□□□□ -2.61
HTTP42858 AC087752.4-201ENST00000605911 462 ntBASIC-1.24□□□□□ -2.61
HTTP42858 AC107905.1-201ENST00000616204 426 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNA5SP405-201ENST00000363059 114 ntBASIC-1.24□□□□□ -2.61
HTTP42858 AC079140.5-201ENST00000507882 310 ntBASIC-1.24□□□□□ -2.61
HTTP42858 AC109347.2-201ENST00000610220 349 ntBASIC-1.24□□□□□ -2.61
HTTP42858 AC099654.12-201ENST00000639868 649 ntBASIC-1.24□□□□□ -2.61
HTTP42858 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.24□□□□□ -2.61
HTTP42858 SNORD115-33-201ENST00000363723 82 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-268P-201ENST00000364174 107 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-946P-201ENST00000383878 107 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-549P-201ENST00000384433 107 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU6-337P-201ENST00000391243 106 ntBASIC-1.24□□□□□ -2.61
HTTP42858 AL603914.1-201ENST00000401964 204 ntBASIC-1.24□□□□□ -2.61
HTTP42858 RNU2-14P-201ENST00000411053 191 ntBASIC-1.24□□□□□ -2.61
HTTP42858 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.24□□□□□ -2.61
HTTP42858 MIR548AG2-201ENST00000581228 64 ntBASIC-1.24□□□□□ -2.61
HTTP42858 MIR302B-201ENST00000362188 73 ntBASIC-1.25□□□□□ -2.61
HTTP42858 RNU6-227P-201ENST00000362865 103 ntBASIC-1.25□□□□□ -2.61
HTTP42858 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.25□□□□□ -2.61
HTTP42858 SNORD114-4-201ENST00000363962 75 ntBASIC-1.25□□□□□ -2.61
HTTP42858 SNORD74.6-201ENST00000364796 70 ntBASIC-1.25□□□□□ -2.61
HTTP42858 AC108019.1-201ENST00000512540 175 ntBASIC-1.25□□□□□ -2.61
HTTP42858 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.25□□□□□ -2.61
HTTP42858 AC009248.2-201ENST00000619826 254 ntBASIC-1.25□□□□□ -2.61
HTTP42858 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.25□□□□□ -2.61
HTTP42858 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.25□□□□□ -2.61
HTTP42858 AC108059.2-201ENST00000434626 151 ntBASIC-1.25□□□□□ -2.61
HTTP42858 MTND1P35-201ENST00000526739 508 ntBASIC-1.25□□□□□ -2.61
HTTP42858 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.25□□□□□ -2.61
HTTP42858 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.26□□□□□ -2.61
HTTP42858 RNU6-190P-201ENST00000384154 102 ntBASIC-1.26□□□□□ -2.61
HTTP42858 RNA5SP237-201ENST00000410414 113 ntBASIC-1.26□□□□□ -2.61
HTTP42858 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.26□□□□□ -2.61
HTTP42858 RNU7-79P-201ENST00000516082 62 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC068339.1-201ENST00000526965 141 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.26□□□□□ -2.61
HTTP42858 AC174048.1-201ENST00000603389 144 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC091931.1-201ENST00000623488 728 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC079248.2-201ENST00000623779 326 ntBASIC-1.26□□□□□ -2.61
HTTP42858 RNU6-194P-201ENST00000363862 105 ntBASIC-1.26□□□□□ -2.61
HTTP42858 RNU6-136P-201ENST00000384663 107 ntBASIC-1.26□□□□□ -2.61
HTTP42858 RNY3P9-201ENST00000384727 106 ntBASIC-1.26□□□□□ -2.61
HTTP42858 USP9YP30-201ENST00000430729 455 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC022616.4-201ENST00000522985 181 ntBASIC-1.26□□□□□ -2.61
HTTP42858 MIR548AM-201ENST00000584298 74 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC098479.1-201ENST00000609225 154 ntBASIC-1.26□□□□□ -2.61
HTTP42858 AC120349.2-201ENST00000625002 298 ntBASIC-1.26□□□□□ -2.61
HTTP42858 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.26□□□□□ -2.61
HTTP42858 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.27□□□□□ -2.61
HTTP42858 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.27□□□□□ -2.61
HTTP42858 SNORA27-201ENST00000384323 126 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU6-831P-201ENST00000384548 107 ntBASIC-1.27□□□□□ -2.61
HTTP42858 SNORD65C-201ENST00000390962 71 ntBASIC-1.27□□□□□ -2.61
HTTP42858 SNORD70.1-201ENST00000391007 85 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU6-592P-201ENST00000411333 103 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU7-140P-201ENST00000459546 60 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU6-531P-201ENST00000516694 104 ntBASIC-1.27□□□□□ -2.61
HTTP42858 MIR3912-201ENST00000577566 105 ntBASIC-1.27□□□□□ -2.61
HTTP42858 MIR4490-201ENST00000582647 84 ntBASIC-1.27□□□□□ -2.61
HTTP42858 AC093783.1-201ENST00000612976 329 ntBASIC-1.27□□□□□ -2.61
HTTP42858 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU6-353P-201ENST00000364266 108 ntBASIC-1.27□□□□□ -2.61
HTTP42858 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.27□□□□□ -2.61
HTTP42858 RNU6-541P-201ENST00000384709 110 ntBASIC-1.27□□□□□ -2.61
HTTP42858 MIR181A1-201ENST00000385026 110 ntBASIC-1.27□□□□□ -2.61
HTTP42858 SNORA40.5-201ENST00000391061 128 ntBASIC-1.27□□□□□ -2.61
HTTP42858 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
HTTP42858 AC073343.1-201ENST00000328239 651 ntBASIC-1.28□□□□□ -2.61
HTTP42858 RNU4-80P-201ENST00000363200 141 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms