Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 Y_RNA.556-201ENST00000384677 113 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 AL392103.1-201ENST00000447000 198 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 RPL39P39-201ENST00000455840 151 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 RNU7-41P-201ENST00000515917 61 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 RN7SKP164-201ENST00000516138 266 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 RNU6-1045P-201ENST00000516321 107 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 RNU7-149P-201ENST00000516739 59 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGCLP35914 AC099654.10-201ENST00000640395 161 ntBASIC0.92□□□□□ -2.26
HMGCLP35914 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
HMGCLP35914 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
HMGCLP35914 RNU6-653P-201ENST00000363074 106 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 RNU6-1309P-201ENST00000363305 108 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 RNU6-238P-201ENST00000363313 106 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 RNY3P5-201ENST00000384127 102 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 Y_RNA.459-201ENST00000384251 102 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 SNORA8.3-201ENST00000384679 139 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 MIR1302-7-201ENST00000408841 72 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 RNU2-55P-201ENST00000411146 174 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 AC007751.1-201ENST00000529260 376 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 MIR4662B-201ENST00000579498 81 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 MIR548AR-201ENST00000582191 57 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 AC097639.2-201ENST00000603159 172 ntBASIC0.91□□□□□ -2.26
HMGCLP35914 MIR367-201ENST00000362299 68 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 Y_RNA.4-201ENST00000362333 112 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 Y_RNA.162-201ENST00000363683 102 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 Y_RNA.229-201ENST00000364347 113 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 RNU6-484P-201ENST00000384016 107 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 SNORA24-201ENST00000384096 131 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 SNORA80D-201ENST00000384488 135 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 MIR520C-201ENST00000385005 87 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 RNU6-910P-201ENST00000390844 107 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 SNORD28B-201ENST00000390993 75 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 MIR1185-1-201ENST00000408598 86 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 RNU7-21P-201ENST00000459430 62 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 RNU6-126P-201ENST00000516685 103 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 SNORA18.7-201ENST00000516910 131 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 SNORA70.22-201ENST00000517160 124 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 BX284668.6-201ENST00000606899 438 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
HMGCLP35914 Y_RNA.14-201ENST00000362415 103 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 RNA5SP264-201ENST00000363115 107 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 SNORD114-27-201ENST00000363766 70 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 RNA5SP48-201ENST00000363969 126 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 SNORD24-201ENST00000383884 75 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 Y_RNA.547-201ENST00000384654 119 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 MIR548A2-201ENST00000384956 97 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 U8.17-201ENST00000391292 132 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 AL078595.1-201ENST00000404458 226 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGCLP35914 MTND1P19-201ENST00000511780 315 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 RNU11-2P-201ENST00000516898 142 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
HMGCLP35914 MIR96-201ENST00000362288 78 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.66-201ENST00000362862 102 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.76-201ENST00000362931 109 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 snoU2_19.4-201ENST00000364329 80 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 RNU4-10P-201ENST00000364383 140 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.293-201ENST00000364908 93 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.370-201ENST00000365589 108 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.486-201ENST00000384398 107 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.537-201ENST00000384626 109 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 Y_RNA.572-201ENST00000384757 98 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 MIR616-201ENST00000385293 97 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 SNORA75.2-201ENST00000391138 150 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 SNORA75.3-201ENST00000391231 150 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 RNU6-381P-201ENST00000391259 108 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 AC002429.1-201ENST00000437672 148 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGCLP35914 SCARNA8-201ENST00000515924 131 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 AC008133.2-201ENST00000624540 351 ntBASIC0.88□□□□□ -2.27
HMGCLP35914 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 Y_RNA.20-201ENST00000362479 113 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 Y_RNA.24-201ENST00000362508 103 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNU6-888P-201ENST00000363010 101 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNU1-93P-201ENST00000364704 169 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 Y_RNA.288-201ENST00000364854 92 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 Y_RNA.416-201ENST00000384014 113 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNU2-38P-201ENST00000410856 79 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNU6-938P-201ENST00000411285 103 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 AC023449.1-201ENST00000454464 154 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNU6-1132P-201ENST00000459214 107 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNA5SP153-201ENST00000516498 76 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 AL049861.1-201ENST00000603130 150 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 MIR8070-201ENST00000616510 88 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 AL365265.1-201ENST00000621045 234 ntBASIC0.87□□□□□ -2.27
HMGCLP35914 RNY4P28-201ENST00000365281 93 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 Y_RNA.539-201ENST00000384635 107 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 MIR518F-201ENST00000384973 87 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 MIR548O-201ENST00000408583 114 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 MIR548H3-201ENST00000408771 118 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 AC063976.4-201ENST00000421971 163 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms