Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
SHC1P29353 MIR378D2-201ENST00000580636 98 ntBASIC1.3□□□□□ -2.2
SHC1P29353 MIR8074-201ENST00000615081 81 ntBASIC1.3□□□□□ -2.2
SHC1P29353 RNY1P11-201ENST00000363759 113 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNU6-151P-201ENST00000364158 107 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNU6-1336P-201ENST00000383886 109 ntBASIC1.29□□□□□ -2.2
SHC1P29353 SNORD116-18-201ENST00000383961 92 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNU6-746P-201ENST00000384112 109 ntBASIC1.29□□□□□ -2.2
SHC1P29353 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SHC1P29353 RNU6-360P-201ENST00000390944 104 ntBASIC1.29□□□□□ -2.2
SHC1P29353 AL034345.1-201ENST00000407768 123 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNU2-70P-201ENST00000410718 179 ntBASIC1.29□□□□□ -2.2
SHC1P29353 BTF3P4-201ENST00000418852 495 ntBASIC1.29□□□□□ -2.2
SHC1P29353 snoU13.27-201ENST00000459278 104 ntBASIC1.29□□□□□ -2.2
SHC1P29353 AC107027.2-201ENST00000512197 115 ntBASIC1.29□□□□□ -2.2
SHC1P29353 Y_RNA.666-201ENST00000516187 112 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNA5SP153-201ENST00000516498 76 ntBASIC1.29□□□□□ -2.2
SHC1P29353 RNA5SP481-201ENST00000516814 122 ntBASIC1.29□□□□□ -2.2
SHC1P29353 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
SHC1P29353 SNORA28-201ENST00000606769 126 ntBASIC1.29□□□□□ -2.2
SHC1P29353 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.29□□□□□ -2.2
SHC1P29353 AC095038.3-201ENST00000634439 195 ntBASIC1.29□□□□□ -2.2
SHC1P29353 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
SHC1P29353 RNU6-268P-201ENST00000364174 107 ntBASIC1.28□□□□□ -2.2
SHC1P29353 RNU6-978P-201ENST00000364371 103 ntBASIC1.28□□□□□ -2.2
SHC1P29353 RNU6-1082P-201ENST00000364574 107 ntBASIC1.28□□□□□ -2.2
SHC1P29353 RNU6-449P-201ENST00000383914 107 ntBASIC1.28□□□□□ -2.2
SHC1P29353 SNORD61-201ENST00000384252 73 ntBASIC1.28□□□□□ -2.2
SHC1P29353 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
SHC1P29353 AC093850.1-201ENST00000454121 251 ntBASIC1.28□□□□□ -2.2
SHC1P29353 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
SHC1P29353 SNORD116-25-201ENST00000516517 92 ntBASIC1.28□□□□□ -2.2
SHC1P29353 Y_RNA.714-201ENST00000517065 90 ntBASIC1.28□□□□□ -2.2
SHC1P29353 AC097639.2-201ENST00000603159 172 ntBASIC1.28□□□□□ -2.2
SHC1P29353 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
SHC1P29353 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.27□□□□□ -2.21
SHC1P29353 snoU2-30.1-201ENST00000365012 70 ntBASIC1.27□□□□□ -2.21
SHC1P29353 Y_RNA.337-201ENST00000365312 102 ntBASIC1.27□□□□□ -2.21
SHC1P29353 RNY1P5-201ENST00000383890 115 ntBASIC1.27□□□□□ -2.21
SHC1P29353 SNORA1-201ENST00000384107 130 ntBASIC1.27□□□□□ -2.21
SHC1P29353 RNU6-163P-201ENST00000384396 106 ntBASIC1.27□□□□□ -2.21
SHC1P29353 RNU6-950P-201ENST00000384651 107 ntBASIC1.27□□□□□ -2.21
SHC1P29353 MIR548A2-201ENST00000384956 97 ntBASIC1.27□□□□□ -2.21
SHC1P29353 SNORA79-201ENST00000408376 140 ntBASIC1.27□□□□□ -2.21
SHC1P29353 RNU6-588P-201ENST00000410281 105 ntBASIC1.27□□□□□ -2.21
SHC1P29353 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
SHC1P29353 RNU7-34P-201ENST00000459394 64 ntBASIC1.27□□□□□ -2.21
SHC1P29353 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
SHC1P29353 RNU7-12P-201ENST00000516030 62 ntBASIC1.27□□□□□ -2.21
SHC1P29353 RNU6-365P-201ENST00000517113 106 ntBASIC1.27□□□□□ -2.21
SHC1P29353 AC007751.1-201ENST00000529260 376 ntBASIC1.27□□□□□ -2.21
SHC1P29353 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
SHC1P29353 MIR4662B-201ENST00000579498 81 ntBASIC1.27□□□□□ -2.21
SHC1P29353 AC087685.1-201ENST00000587507 141 ntBASIC1.27□□□□□ -2.21
SHC1P29353 DNAJC19P2-201ENST00000593340 302 ntBASIC1.27□□□□□ -2.21
SHC1P29353 AC120024.3-201ENST00000603167 156 ntBASIC1.27□□□□□ -2.21
SHC1P29353 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
SHC1P29353 Y_RNA.778-201ENST00000620203 90 ntBASIC1.27□□□□□ -2.21
SHC1P29353 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.27□□□□□ -2.21
SHC1P29353 Y_RNA.400-201ENST00000383963 111 ntBASIC1.26□□□□□ -2.21
SHC1P29353 Y_RNA.521-201ENST00000384560 114 ntBASIC1.26□□□□□ -2.21
SHC1P29353 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
SHC1P29353 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
SHC1P29353 RNA5SP272-201ENST00000516095 111 ntBASIC1.26□□□□□ -2.21
SHC1P29353 RNU6-693P-201ENST00000516134 107 ntBASIC1.26□□□□□ -2.21
SHC1P29353 AC006441.5-201ENST00000612680 209 ntBASIC1.26□□□□□ -2.21
SHC1P29353 AC027279.3-201ENST00000625055 122 ntBASIC1.26□□□□□ -2.21
SHC1P29353 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SHC1P29353 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
SHC1P29353 RNU6-833P-201ENST00000363486 107 ntBASIC1.25□□□□□ -2.21
SHC1P29353 SNORD14E-201ENST00000364009 85 ntBASIC1.25□□□□□ -2.21
SHC1P29353 Y_RNA.215-201ENST00000364204 112 ntBASIC1.25□□□□□ -2.21
SHC1P29353 RNU4-11P-201ENST00000365287 132 ntBASIC1.25□□□□□ -2.21
SHC1P29353 Y_RNA.336-201ENST00000365307 109 ntBASIC1.25□□□□□ -2.21
SHC1P29353 Y_RNA.338-201ENST00000365320 114 ntBASIC1.25□□□□□ -2.21
SHC1P29353 RNU6-597P-201ENST00000365620 102 ntBASIC1.25□□□□□ -2.21
SHC1P29353 Y_RNA.393-201ENST00000383936 102 ntBASIC1.25□□□□□ -2.21
SHC1P29353 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
SHC1P29353 snoU13.9-201ENST00000458927 103 ntBASIC1.25□□□□□ -2.21
SHC1P29353 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
SHC1P29353 CYCTP-201ENST00000504253 315 ntBASIC1.25□□□□□ -2.21
SHC1P29353 RNU7-25P-201ENST00000516544 62 ntBASIC1.25□□□□□ -2.21
SHC1P29353 RNU6-504P-201ENST00000516568 104 ntBASIC1.25□□□□□ -2.21
SHC1P29353 Y_RNA.703-201ENST00000516846 111 ntBASIC1.25□□□□□ -2.21
SHC1P29353 RNU6-1270P-201ENST00000517128 108 ntBASIC1.25□□□□□ -2.21
SHC1P29353 MIR4498-201ENST00000577599 66 ntBASIC1.25□□□□□ -2.21
SHC1P29353 MIR4778-201ENST00000577635 80 ntBASIC1.25□□□□□ -2.21
SHC1P29353 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
SHC1P29353 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.25□□□□□ -2.21
SHC1P29353 MIR6844-201ENST00000637122 62 ntBASIC1.25□□□□□ -2.21
SHC1P29353 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SHC1P29353 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
SHC1P29353 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
SHC1P29353 RNU6-888P-201ENST00000363010 101 ntBASIC1.24□□□□□ -2.21
SHC1P29353 RNU6-414P-201ENST00000363705 104 ntBASIC1.24□□□□□ -2.21
SHC1P29353 SNORD24-201ENST00000383884 75 ntBASIC1.24□□□□□ -2.21
SHC1P29353 MIR518F-201ENST00000384973 87 ntBASIC1.24□□□□□ -2.21
SHC1P29353 MIR660-201ENST00000385235 97 ntBASIC1.24□□□□□ -2.21
SHC1P29353 SNORA26-201ENST00000391286 122 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms