Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.350-201ENST00000365409 98 ntBASIC1.13□□□□□ -2.23
CDH3P22223 Y_RNA.477-201ENST00000384352 108 ntBASIC1.13□□□□□ -2.23
CDH3P22223 Y_RNA.539-201ENST00000384635 107 ntBASIC1.13□□□□□ -2.23
CDH3P22223 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
CDH3P22223 AC245047.7-201ENST00000440265 293 ntBASIC1.13□□□□□ -2.23
CDH3P22223 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
CDH3P22223 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CDH3P22223 Pinc.1-201ENST00000616452 154 ntBASIC1.13□□□□□ -2.23
CDH3P22223 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
CDH3P22223 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
CDH3P22223 Y_RNA.292-201ENST00000364904 97 ntBASIC1.12□□□□□ -2.23
CDH3P22223 Y_RNA.452-201ENST00000384202 108 ntBASIC1.12□□□□□ -2.23
CDH3P22223 RNU6-463P-201ENST00000384340 107 ntBASIC1.12□□□□□ -2.23
CDH3P22223 MIR1287-201ENST00000408492 90 ntBASIC1.12□□□□□ -2.23
CDH3P22223 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH3P22223 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
CDH3P22223 RPL39P39-201ENST00000455840 151 ntBASIC1.12□□□□□ -2.23
CDH3P22223 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
CDH3P22223 RNU7-41P-201ENST00000515917 61 ntBASIC1.12□□□□□ -2.23
CDH3P22223 SCARNA8-201ENST00000515924 131 ntBASIC1.12□□□□□ -2.23
CDH3P22223 Y_RNA.673-201ENST00000516306 88 ntBASIC1.12□□□□□ -2.23
CDH3P22223 MIR4764-201ENST00000580680 88 ntBASIC1.12□□□□□ -2.23
CDH3P22223 BX284668.6-201ENST00000606899 438 ntBASIC1.12□□□□□ -2.23
CDH3P22223 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.12□□□□□ -2.23
CDH3P22223 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
CDH3P22223 AC015726.2-201ENST00000620112 122 ntBASIC1.12□□□□□ -2.23
CDH3P22223 7SK.10-201ENST00000621414 298 ntBASIC1.12□□□□□ -2.23
CDH3P22223 Y_RNA.20-201ENST00000362479 113 ntBASIC1.11□□□□□ -2.23
CDH3P22223 Y_RNA.144-201ENST00000363521 113 ntBASIC1.11□□□□□ -2.23
CDH3P22223 SNORD27-201ENST00000363981 72 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNU6-702P-201ENST00000364982 107 ntBASIC1.11□□□□□ -2.23
CDH3P22223 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
CDH3P22223 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
CDH3P22223 Y_RNA.486-201ENST00000384398 107 ntBASIC1.11□□□□□ -2.23
CDH3P22223 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MIR520C-201ENST00000385005 87 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MIR518E-201ENST00000385252 88 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MT-TT-201ENST00000387460 66 ntBASIC1.11□□□□□ -2.23
CDH3P22223 SNORD28B-201ENST00000390993 75 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNU6-381P-201ENST00000391259 108 ntBASIC1.11□□□□□ -2.23
CDH3P22223 SNORD58.1-201ENST00000391313 66 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
CDH3P22223 COX6CP14-201ENST00000469580 174 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNU4-57P-201ENST00000515980 135 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNU7-25P-201ENST00000516544 62 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNU7-43P-201ENST00000516554 64 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNU6-453P-201ENST00000516819 85 ntBASIC1.11□□□□□ -2.23
CDH3P22223 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MIR3128-201ENST00000581957 66 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MIR548AR-201ENST00000582191 57 ntBASIC1.11□□□□□ -2.23
CDH3P22223 MIR3149-201ENST00000584629 83 ntBASIC1.11□□□□□ -2.23
CDH3P22223 AL391903.3-201ENST00000612158 163 ntBASIC1.11□□□□□ -2.23
CDH3P22223 Y_RNA.60-201ENST00000362831 98 ntBASIC1.1□□□□□ -2.23
CDH3P22223 Y_RNA.226-201ENST00000364337 114 ntBASIC1.1□□□□□ -2.23
CDH3P22223 MIR616-201ENST00000385293 97 ntBASIC1.1□□□□□ -2.23
CDH3P22223 MIR548O-201ENST00000408583 114 ntBASIC1.1□□□□□ -2.23
CDH3P22223 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH3P22223 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH3P22223 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
CDH3P22223 Y_RNA.666-201ENST00000516187 112 ntBASIC1.1□□□□□ -2.23
CDH3P22223 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
CDH3P22223 AL022345.2-201ENST00000606307 135 ntBASIC1.1□□□□□ -2.23
CDH3P22223 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH3P22223 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CDH3P22223 Y_RNA.262-201ENST00000364641 102 ntBASIC1.09□□□□□ -2.23
CDH3P22223 Y_RNA.269-201ENST00000364685 89 ntBASIC1.09□□□□□ -2.23
CDH3P22223 Y_RNA.307-201ENST00000365022 117 ntBASIC1.09□□□□□ -2.23
CDH3P22223 RNY4P28-201ENST00000365281 93 ntBASIC1.09□□□□□ -2.23
CDH3P22223 RNU6-484P-201ENST00000384016 107 ntBASIC1.09□□□□□ -2.23
CDH3P22223 Y_RNA.547-201ENST00000384654 119 ntBASIC1.09□□□□□ -2.23
CDH3P22223 U8.17-201ENST00000391292 132 ntBASIC1.09□□□□□ -2.23
CDH3P22223 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
CDH3P22223 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH3P22223 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
CDH3P22223 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH3P22223 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
CDH3P22223 RNU7-181P-201ENST00000517234 74 ntBASIC1.09□□□□□ -2.23
CDH3P22223 AC007751.1-201ENST00000529260 376 ntBASIC1.09□□□□□ -2.23
CDH3P22223 MIR4662B-201ENST00000579498 81 ntBASIC1.09□□□□□ -2.23
CDH3P22223 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
CDH3P22223 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
CDH3P22223 RNU4-17P-201ENST00000365598 141 ntBASIC1.08□□□□□ -2.24
CDH3P22223 Y_RNA.447-201ENST00000384184 113 ntBASIC1.08□□□□□ -2.24
CDH3P22223 SNORA25-201ENST00000384384 134 ntBASIC1.08□□□□□ -2.24
CDH3P22223 MIR548A2-201ENST00000384956 97 ntBASIC1.08□□□□□ -2.24
CDH3P22223 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
CDH3P22223 AL606845.1-201ENST00000404881 255 ntBASIC1.08□□□□□ -2.24
CDH3P22223 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
CDH3P22223 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.08□□□□□ -2.24
CDH3P22223 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.08□□□□□ -2.24
CDH3P22223 RNU6-1023P-201ENST00000516137 106 ntBASIC1.08□□□□□ -2.24
CDH3P22223 AP003716.2-201ENST00000528260 108 ntBASIC1.08□□□□□ -2.24
CDH3P22223 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
CDH3P22223 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CDH3P22223 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDH3P22223 Y_RNA.65-201ENST00000362846 100 ntBASIC1.07□□□□□ -2.24
CDH3P22223 RNY3P5-201ENST00000384127 102 ntBASIC1.07□□□□□ -2.24
CDH3P22223 Y_RNA.478-201ENST00000384358 107 ntBASIC1.07□□□□□ -2.24
CDH3P22223 RPS26P48-201ENST00000491713 339 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms