Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-426P-201ENST00000516464 97 ntBASIC2.5□□□□□ -2.01
ERCC3P19447 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.5□□□□□ -2.01
ERCC3P19447 AL365205.2-201ENST00000594586 68 ntBASIC2.5□□□□□ -2.01
ERCC3P19447 AC103810.8-201ENST00000607347 118 ntBASIC2.5□□□□□ -2.01
ERCC3P19447 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ERCC3P19447 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ERCC3P19447 MIR342-201ENST00000362212 99 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 SNORD18B-201ENST00000365659 72 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 Y_RNA.497-201ENST00000384447 98 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 U8.17-201ENST00000391292 132 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 AP003484.1-201ENST00000530974 250 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.49□□□□□ -2.01
ERCC3P19447 AC009831.4-201ENST00000620744 325 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 MIR6132-201ENST00000622083 109 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 AC091895.1-201ENST00000624494 256 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 AC092881.1-201ENST00000638218 2733 ntBASIC2.49□□□□□ -2.01
ERCC3P19447 SNORD77.3-201ENST00000391113 65 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 RNA5SP489-201ENST00000410986 109 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 AL161935.2-201ENST00000414627 60 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 RNU5E-3P-201ENST00000515913 68 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 SNORD36C-201ENST00000516733 66 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 RNU7-70P-201ENST00000516941 66 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 WWP1P1-201ENST00000466609 2769 ntBASIC2.48□□□□□ -2.01
ERCC3P19447 SNORA2.2-201ENST00000365473 135 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 RNU6-460P-201ENST00000391158 108 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 AL603825.1-201ENST00000438481 80 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 AC092991.1-201ENST00000477176 376 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 RNU6-917P-201ENST00000516294 104 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 RNU6-922P-201ENST00000516753 99 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 SNORA77B-201ENST00000578179 125 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 AC002984.1-201ENST00000591692 448 ntBASIC2.47□□□□□ -2.01
ERCC3P19447 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.47□□□□□ -2.01
ERCC3P19447 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
ERCC3P19447 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ERCC3P19447 Y_RNA.410-201ENST00000383992 113 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 MIR624-201ENST00000385217 97 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 MIR569-201ENST00000385228 96 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 AL451046.2-201ENST00000403074 277 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 AC087499.4-201ENST00000448505 178 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 AC107297.1-201ENST00000459991 176 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 AC019176.1-201ENST00000518519 225 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 AC131055.1-201ENST00000584626 316 ntBASIC2.46□□□□□ -2.02
ERCC3P19447 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
ERCC3P19447 SNORA1.2-201ENST00000365189 134 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 Y_RNA.370-201ENST00000365589 108 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 RNU6-1292P-201ENST00000383856 107 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 SNX2P2-201ENST00000424553 323 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.45□□□□□ -2.02
ERCC3P19447 SNORD123-201ENST00000459473 70 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 RNU4-57P-201ENST00000515980 135 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 RNU6-548P-201ENST00000517083 115 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 AL353997.5-201ENST00000618886 171 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 AP000553.5-201ENST00000641933 54 ntBASIC2.45□□□□□ -2.02
ERCC3P19447 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ERCC3P19447 Y_RNA.420-201ENST00000384043 110 ntBASIC2.44□□□□□ -2.02
ERCC3P19447 U8.13-201ENST00000390842 128 ntBASIC2.44□□□□□ -2.02
ERCC3P19447 RNU4-61P-201ENST00000411243 107 ntBASIC2.44□□□□□ -2.02
ERCC3P19447 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.44□□□□□ -2.02
ERCC3P19447 RNU6-830P-201ENST00000516353 107 ntBASIC2.44□□□□□ -2.02
ERCC3P19447 AP001485.1-201ENST00000604799 199 ntBASIC2.44□□□□□ -2.02
ERCC3P19447 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
ERCC3P19447 RNY1P11-201ENST00000363759 113 ntBASIC2.43□□□□□ -2.02
ERCC3P19447 MIR613-201ENST00000385248 95 ntBASIC2.43□□□□□ -2.02
ERCC3P19447 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.43□□□□□ -2.02
ERCC3P19447 MIR3937-201ENST00000580135 106 ntBASIC2.43□□□□□ -2.02
ERCC3P19447 MIR4448-201ENST00000584360 86 ntBASIC2.43□□□□□ -2.02
ERCC3P19447 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ERCC3P19447 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.43□□□□□ -2.02
ERCC3P19447 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.42□□□□□ -2.02
ERCC3P19447 Y_RNA.52-201ENST00000362760 96 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 RNU6-1067P-201ENST00000384752 107 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 MIR570-201ENST00000384917 97 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 AC079140.2-201ENST00000506193 142 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 RNU6-947P-201ENST00000516264 106 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 RNU6-1149P-201ENST00000516810 97 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 RNU6-295P-201ENST00000516901 104 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 AC090049.2-201ENST00000550377 109 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.42□□□□□ -2.02
ERCC3P19447 MTND5P32-201ENST00000560711 1802 ntBASIC2.42□□□□□ -2.02
ERCC3P19447 AC010332.2-201ENST00000613083 1904 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 U8.1-201ENST00000362843 134 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 AC090821.2-201ENST00000523552 176 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 AP001328.1-201ENST00000528550 176 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 AC015688.6-201ENST00000577737 104 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 MIR548AR-201ENST00000582191 57 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 MIR5197-201ENST00000583721 112 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.41□□□□□ -2.02
ERCC3P19447 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.41□□□□□ -2.02
ERCC3P19447 RNU6-915P-201ENST00000364943 103 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 Y_RNA.351-201ENST00000365436 96 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 SNORA27-201ENST00000384323 126 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 Y_RNA.568-201ENST00000384742 113 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 MIR520C-201ENST00000385005 87 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 RNU6-938P-201ENST00000411285 103 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 RNU7-67P-201ENST00000459003 62 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 SNORA74.3-201ENST00000517108 154 ntBASIC2.4□□□□□ -2.03
ERCC3P19447 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms