Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPL30P10-201ENST00000488148 337 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-2.25□□□□□ -2.77
HMGA1P17096 MIR3139-201ENST00000579145 76 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 RNU6-85P-201ENST00000605989 107 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 AC145423.2-201ENST00000610631 239 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 Y_RNA.241-201ENST00000364470 117 ntBASIC-2.26□□□□□ -2.77
HMGA1P17096 UBE2D3P4-201ENST00000441973 436 ntBASIC-2.26□□□□□ -2.77
HMGA1P17096 MTCO2P3-201ENST00000442543 421 ntBASIC-2.26□□□□□ -2.77
HMGA1P17096 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-2.26□□□□□ -2.77
HMGA1P17096 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.26□□□□□ -2.77
HMGA1P17096 UBL5P4-201ENST00000562584 236 ntBASIC-2.26□□□□□ -2.77
HMGA1P17096 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-2.26□□□□□ -2.77
HMGA1P17096 RNA5SP93-201ENST00000362525 114 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 RNY4P28-201ENST00000365281 93 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 RNU6-597P-201ENST00000365620 102 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 RNU6-83P-201ENST00000384568 112 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 RNU7-74P-201ENST00000459104 62 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 AC069113.1-201ENST00000517763 267 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 AC022616.6-201ENST00000520479 119 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 MTND4LP25-201ENST00000570218 163 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 AC087683.2-201ENST00000611384 326 ntBASIC-2.27□□□□□ -2.77
HMGA1P17096 SNORD115-25-201ENST00000362619 82 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 SNORD115-7-201ENST00000365306 82 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 RNU6-767P-201ENST00000384132 107 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 MIR558-201ENST00000384920 94 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 MIR507-201ENST00000385234 94 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 RNU4-61P-201ENST00000411243 107 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 MTCO1P29-201ENST00000496868 288 ntBASIC-2.28□□□□□ -2.77
HMGA1P17096 RNU6-1287P-201ENST00000362914 107 ntBASIC-2.29□□□□□ -2.78
HMGA1P17096 Y_RNA.179-201ENST00000363844 90 ntBASIC-2.29□□□□□ -2.78
HMGA1P17096 RNU6-1060P-201ENST00000384664 107 ntBASIC-2.29□□□□□ -2.78
HMGA1P17096 SNORD70.1-201ENST00000391007 85 ntBASIC-2.29□□□□□ -2.78
HMGA1P17096 MTND2P18-201ENST00000419962 1030 ntBASIC-2.29□□□□□ -2.78
HMGA1P17096 AC011603.4-201ENST00000611325 277 ntBASIC-2.29□□□□□ -2.78
HMGA1P17096 Y_RNA.110-201ENST00000363220 99 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 Y_RNA.319-201ENST00000365138 92 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 MT-TM-201ENST00000387377 68 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 RNU6-757P-201ENST00000410334 100 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 MTND1P11-201ENST00000456661 876 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 RNU6-201P-201ENST00000517100 61 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 RNU6-88P-201ENST00000606801 100 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 AC079248.2-201ENST00000623779 326 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 U6.115-201ENST00000636045 103 ntBASIC-2.3□□□□□ -2.78
HMGA1P17096 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.31□□□□□ -2.78
HMGA1P17096 RNU6-723P-201ENST00000383973 107 ntBASIC-2.31□□□□□ -2.78
HMGA1P17096 RNU2-9P-201ENST00000410194 145 ntBASIC-2.31□□□□□ -2.78
HMGA1P17096 RNU4-55P-201ENST00000410731 137 ntBASIC-2.31□□□□□ -2.78
HMGA1P17096 RNU6-1337P-201ENST00000516525 95 ntBASIC-2.31□□□□□ -2.78
HMGA1P17096 SNORD115-27-201ENST00000364430 82 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 SNORD115-26-201ENST00000365067 82 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 RNU7-53P-201ENST00000516705 60 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 RNU6-1258P-201ENST00000516911 111 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.32□□□□□ -2.78
HMGA1P17096 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.32□□□□□ -2.78
HMGA1P17096 AL121757.2-201ENST00000611223 313 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 AL391262.2-201ENST00000622466 494 ntBASIC-2.32□□□□□ -2.78
HMGA1P17096 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-2.32□□□□□ -2.78
HMGA1P17096 MIR20A-201ENST00000362279 71 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 RNA5SP405-201ENST00000363059 114 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 RNU6-236P-201ENST00000363886 106 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 RNU6-553P-201ENST00000364047 96 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 RNU6-280P-201ENST00000364145 104 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 RNU6-1317P-201ENST00000364582 104 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2.33□□□□□ -2.78
HMGA1P17096 RNU6-966P-201ENST00000516479 104 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 AC141846.1-201ENST00000568348 142 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 AC027807.2-201ENST00000616099 408 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 AC069503.3-201ENST00000618674 145 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 AC007671.2-201ENST00000637344 619 ntBASIC-2.33□□□□□ -2.78
HMGA1P17096 SNORD114-7-201ENST00000362520 77 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 SNORA49-201ENST00000386157 136 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 RNU6-1203P-201ENST00000410703 110 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 AC023449.1-201ENST00000454464 154 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 MIR8084-201ENST00000614105 89 ntBASIC-2.34□□□□□ -2.78
HMGA1P17096 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 RNU6-393P-201ENST00000384475 107 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 Y_RNA.547-201ENST00000384654 119 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 ELOCP4-201ENST00000420090 333 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 RPL22P17-201ENST00000438729 315 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 RNU2-69P-201ENST00000516061 100 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 RNU6-720P-201ENST00000516363 108 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-2.35□□□□□ -2.79
HMGA1P17096 PART1_1.1-201ENST00000611761 217 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 U6.114-201ENST00000636407 96 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 MIR376A2-201ENST00000636782 80 ntBASIC-2.35□□□□□ -2.79
HMGA1P17096 RNU4-58P-201ENST00000363192 141 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms