Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 MIR3658-201ENST00000636291 56 ntBASIC2.14□□□□□ -2.07
ATP2A2P16615 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ATP2A2P16615 MIR499A-201ENST00000384903 122 ntBASIC2.13□□□□□ -2.07
ATP2A2P16615 SNORD13-201ENST00000459299 104 ntBASIC2.13□□□□□ -2.07
ATP2A2P16615 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
ATP2A2P16615 RNU6-1270P-201ENST00000517128 108 ntBASIC2.13□□□□□ -2.07
ATP2A2P16615 AC090142.3-201ENST00000519012 385 ntBASIC2.13□□□□□ -2.07
ATP2A2P16615 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
ATP2A2P16615 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
ATP2A2P16615 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATP2A2P16615 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
ATP2A2P16615 Y_RNA.355-201ENST00000365462 98 ntBASIC2.12□□□□□ -2.07
ATP2A2P16615 MIR613-201ENST00000385248 95 ntBASIC2.12□□□□□ -2.07
ATP2A2P16615 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ATP2A2P16615 JTBP1-201ENST00000441314 247 ntBASIC2.12□□□□□ -2.07
ATP2A2P16615 AC007751.1-201ENST00000529260 376 ntBASIC2.12□□□□□ -2.07
ATP2A2P16615 MIR8070-201ENST00000616510 88 ntBASIC2.12□□□□□ -2.07
ATP2A2P16615 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ATP2A2P16615 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
ATP2A2P16615 RNY1P10-201ENST00000363268 113 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 RNU6-818P-201ENST00000364837 108 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 SNORD50.2-201ENST00000365465 70 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 RNU6-1292P-201ENST00000383856 107 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.11□□□□□ -2.07
ATP2A2P16615 AC015922.2-201ENST00000435593 184 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 RN7SL274P-201ENST00000492268 272 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 RNU6-346P-201ENST00000516288 111 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 SNORA18.4-201ENST00000516440 124 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
ATP2A2P16615 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATP2A2P16615 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATP2A2P16615 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATP2A2P16615 MIR518F-201ENST00000384973 87 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 RNA5SP127-201ENST00000411051 133 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.1□□□□□ -2.07
ATP2A2P16615 AC003989.2-201ENST00000440224 169 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.1□□□□□ -2.07
ATP2A2P16615 TRMT112P2-201ENST00000512910 132 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 RNU6-830P-201ENST00000516353 107 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 RNU7-25P-201ENST00000516544 62 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 AL359821.1-201ENST00000605519 182 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 AC134878.1-201ENST00000619901 243 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 AC015726.2-201ENST00000620112 122 ntBASIC2.1□□□□□ -2.07
ATP2A2P16615 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATP2A2P16615 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATP2A2P16615 SNORD115-28-201ENST00000363931 81 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 RNU6-1082P-201ENST00000364574 107 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 RNU6-203P-201ENST00000384038 104 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 RNU6-187P-201ENST00000384139 106 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 Y_RNA.547-201ENST00000384654 119 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 MIR194-1-201ENST00000384892 85 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 MIR624-201ENST00000385217 97 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 MIR1267-201ENST00000408723 78 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 RNU6-588P-201ENST00000410281 105 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 AC093850.1-201ENST00000454121 251 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 MIR4778-201ENST00000577635 80 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
ATP2A2P16615 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.08
ATP2A2P16615 ICE2P2-201ENST00000483823 2787 ntBASIC2.09□□□□□ -2.08
ATP2A2P16615 SNORA25.9-201ENST00000365087 128 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 Y_RNA.410-201ENST00000383992 113 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 SNORA1-201ENST00000384107 130 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 MIR136-201ENST00000385207 82 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 MIR569-201ENST00000385228 96 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 AL627390.1-201ENST00000396055 340 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 RNU4-61P-201ENST00000411243 107 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 MIR3129-201ENST00000581095 76 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 MIR8074-201ENST00000615081 81 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 WWP1P1-201ENST00000466609 2769 ntBASIC2.08□□□□□ -2.08
ATP2A2P16615 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ATP2A2P16615 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ATP2A2P16615 RNU4-62P-201ENST00000410125 130 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AL161935.2-201ENST00000414627 60 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AP1B1P2-201ENST00000416196 106 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AC087499.4-201ENST00000448505 178 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AC245517.4-201ENST00000448601 281 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 RNA5SP445-201ENST00000515889 115 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 SNORA25.12-201ENST00000516202 82 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AC131055.1-201ENST00000584626 316 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AP001485.1-201ENST00000604799 199 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
ATP2A2P16615 AL442644.1-201ENST00000454390 3105 ntBASIC2.06□□□□□ -2.08
ATP2A2P16615 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
ATP2A2P16615 Y_RNA.584-201ENST00000391090 114 ntBASIC2.06□□□□□ -2.08
ATP2A2P16615 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
ATP2A2P16615 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.06□□□□□ -2.08
ATP2A2P16615 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ATP2A2P16615 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
ATP2A2P16615 RNU6-704P-201ENST00000364162 103 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms