Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU6-1167P-201ENST00000363227 94 ntBASIC-2.76□□□□□ -2.85
VCANP13611 AL122001.1-201ENST00000457027 370 ntBASIC-2.76□□□□□ -2.85
VCANP13611 AP001542.1-201ENST00000591314 200 ntBASIC-2.76□□□□□ -2.85
VCANP13611 SNORD65-201ENST00000391079 73 ntBASIC-2.77□□□□□ -2.85
VCANP13611 RNU2-13P-201ENST00000515909 113 ntBASIC-2.77□□□□□ -2.85
VCANP13611 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
VCANP13611 HMGN3P1-201ENST00000453847 193 ntBASIC-2.77□□□□□ -2.85
VCANP13611 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.77□□□□□ -2.85
VCANP13611 MIR4460-201ENST00000577862 86 ntBASIC-2.77□□□□□ -2.85
VCANP13611 RNU6-188P-201ENST00000364207 107 ntBASIC-2.77□□□□□ -2.85
VCANP13611 RNU6-454P-201ENST00000364292 107 ntBASIC-2.77□□□□□ -2.85
VCANP13611 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.77□□□□□ -2.85
VCANP13611 MTCYBP2-201ENST00000407745 171 ntBASIC-2.77□□□□□ -2.85
VCANP13611 AL158211.4-201ENST00000606988 584 ntBASIC-2.77□□□□□ -2.85
VCANP13611 RNY3P3-201ENST00000363816 102 ntBASIC-2.78□□□□□ -2.85
VCANP13611 Y_RNA.450-201ENST00000384198 113 ntBASIC-2.78□□□□□ -2.85
VCANP13611 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.78□□□□□ -2.85
VCANP13611 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-2.78□□□□□ -2.85
VCANP13611 ZNF321P-202ENST00000550843 495 ntBASIC-2.78□□□□□ -2.85
VCANP13611 AP001282.2-201ENST00000616149 309 ntBASIC-2.78□□□□□ -2.85
VCANP13611 AC022306.3-201ENST00000619930 550 ntBASIC-2.78□□□□□ -2.85
VCANP13611 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-2.78□□□□□ -2.86
VCANP13611 PSMA6P3-201ENST00000428242 164 ntBASIC-2.78□□□□□ -2.86
VCANP13611 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.78□□□□□ -2.86
VCANP13611 AL359920.1-201ENST00000618332 176 ntBASIC-2.78□□□□□ -2.86
VCANP13611 AC137590.2-201ENST00000619709 240 ntBASIC-2.78□□□□□ -2.86
VCANP13611 RNA5SP403-201ENST00000363598 108 ntBASIC-2.79□□□□□ -2.86
VCANP13611 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.79□□□□□ -2.86
VCANP13611 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-2.79□□□□□ -2.86
VCANP13611 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.79□□□□□ -2.86
VCANP13611 MTND3P13-201ENST00000574391 343 ntBASIC-2.79□□□□□ -2.86
VCANP13611 SNORD51.1-201ENST00000365405 77 ntBASIC-2.79□□□□□ -2.86
VCANP13611 RNU4-55P-201ENST00000410731 137 ntBASIC-2.79□□□□□ -2.86
VCANP13611 AP003400.6-201ENST00000624698 740 ntBASIC-2.79□□□□□ -2.86
VCANP13611 RNU6-608P-201ENST00000383927 104 ntBASIC-2.8□□□□□ -2.86
VCANP13611 SNORA72.6-201ENST00000384520 129 ntBASIC-2.8□□□□□ -2.86
VCANP13611 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.8□□□□□ -2.86
VCANP13611 AC022441.3-201ENST00000605737 136 ntBASIC-2.8□□□□□ -2.86
VCANP13611 SNORD115-14-201ENST00000363090 81 ntBASIC-2.8□□□□□ -2.86
VCANP13611 AC007547.1-201ENST00000462177 490 ntBASIC-2.8□□□□□ -2.86
VCANP13611 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.8□□□□□ -2.86
VCANP13611 U7.5-201ENST00000517224 61 ntBASIC-2.8□□□□□ -2.86
VCANP13611 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-2.8□□□□□ -2.86
VCANP13611 RNU6-961P-201ENST00000363893 105 ntBASIC-2.8□□□□□ -2.86
VCANP13611 Y_RNA.515-201ENST00000384535 112 ntBASIC-2.8□□□□□ -2.86
VCANP13611 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.8□□□□□ -2.86
VCANP13611 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.8□□□□□ -2.86
VCANP13611 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-2.8□□□□□ -2.86
VCANP13611 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.8□□□□□ -2.86
VCANP13611 AC009878.1-201ENST00000621819 340 ntBASIC-2.8□□□□□ -2.86
VCANP13611 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.81□□□□□ -2.86
VCANP13611 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.81□□□□□ -2.86
VCANP13611 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.81□□□□□ -2.86
VCANP13611 FABP5P15-201ENST00000453566 214 ntBASIC-2.81□□□□□ -2.86
VCANP13611 AC114982.2-201ENST00000461396 358 ntBASIC-2.81□□□□□ -2.86
VCANP13611 MIR4791-201ENST00000607666 84 ntBASIC-2.81□□□□□ -2.86
VCANP13611 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.81□□□□□ -2.86
VCANP13611 SNORD113-3-201ENST00000364830 72 ntBASIC-2.81□□□□□ -2.86
VCANP13611 MIR599-201ENST00000385069 95 ntBASIC-2.81□□□□□ -2.86
VCANP13611 AC079248.2-201ENST00000623779 326 ntBASIC-2.81□□□□□ -2.86
VCANP13611 MTND1P7-201ENST00000632801 297 ntBASIC-2.81□□□□□ -2.86
VCANP13611 AC115990.1-201ENST00000526957 301 ntBASIC-2.81□□□□□ -2.86
VCANP13611 MIR3923-201ENST00000579521 83 ntBASIC-2.81□□□□□ -2.86
VCANP13611 AC023158.2-201ENST00000614876 543 ntBASIC-2.81□□□□□ -2.86
VCANP13611 RNU6-214P-201ENST00000384130 107 ntBASIC-2.82□□□□□ -2.86
VCANP13611 RNU6-1308P-201ENST00000516817 103 ntBASIC-2.82□□□□□ -2.86
VCANP13611 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.82□□□□□ -2.86
VCANP13611 RNU6-978P-201ENST00000364371 103 ntBASIC-2.82□□□□□ -2.86
VCANP13611 RBMX2P4-201ENST00000441256 376 ntBASIC-2.82□□□□□ -2.86
VCANP13611 AC091951.2-201ENST00000500762 203 ntBASIC-2.82□□□□□ -2.86
VCANP13611 AC110760.3-202ENST00000515177 371 ntBASIC-2.82□□□□□ -2.86
VCANP13611 AC231657.1-201ENST00000624313 397 ntBASIC-2.82□□□□□ -2.86
VCANP13611 RNU6-647P-201ENST00000364243 107 ntBASIC-2.83□□□□□ -2.86
VCANP13611 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6-562P-201ENST00000362731 107 ntBASIC-2.83□□□□□ -2.86
VCANP13611 SNORD115-39-201ENST00000363694 82 ntBASIC-2.83□□□□□ -2.86
VCANP13611 MIR582-201ENST00000365731 98 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6-444P-201ENST00000383988 108 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.83□□□□□ -2.86
VCANP13611 AC022447.4-201ENST00000504053 364 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6-522P-201ENST00000364497 107 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6-1251P-201ENST00000364502 107 ntBASIC-2.83□□□□□ -2.86
VCANP13611 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.83□□□□□ -2.86
VCANP13611 AC022616.6-201ENST00000520479 119 ntBASIC-2.83□□□□□ -2.86
VCANP13611 AC009159.2-201ENST00000617603 606 ntBASIC-2.83□□□□□ -2.86
VCANP13611 RNU6-560P-201ENST00000364007 108 ntBASIC-2.84□□□□□ -2.86
VCANP13611 RNU6-106P-201ENST00000384405 107 ntBASIC-2.84□□□□□ -2.86
VCANP13611 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-2.84□□□□□ -2.86
VCANP13611 BX295541.1-201ENST00000417774 250 ntBASIC-2.84□□□□□ -2.86
VCANP13611 RNU6-202P-201ENST00000515998 96 ntBASIC-2.84□□□□□ -2.86
VCANP13611 AC009902.1-201ENST00000519351 183 ntBASIC-2.84□□□□□ -2.86
VCANP13611 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.84□□□□□ -2.86
VCANP13611 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-2.84□□□□□ -2.86
VCANP13611 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.84□□□□□ -2.86
VCANP13611 RNU6-916P-201ENST00000516088 109 ntBASIC-2.84□□□□□ -2.86
VCANP13611 U6.73-201ENST00000619194 103 ntBASIC-2.84□□□□□ -2.86
VCANP13611 RNU6-132P-201ENST00000383863 107 ntBASIC-2.84□□□□□ -2.86
VCANP13611 RNU6-437P-201ENST00000459408 95 ntBASIC-2.85□□□□□ -2.87
VCANP13611 MTCO3P42-201ENST00000509488 518 ntBASIC-2.85□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 277.8 ms