Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-403P-201ENST00000363163 104 ntBASIC-0.83□□□□□ -2.54
TPM1P09493 RNU6-593P-201ENST00000364716 112 ntBASIC-0.83□□□□□ -2.54
TPM1P09493 MTND1P2-201ENST00000430604 821 ntBASIC-0.83□□□□□ -2.54
TPM1P09493 RPL30P15-201ENST00000457129 321 ntBASIC-0.83□□□□□ -2.54
TPM1P09493 AC091951.2-201ENST00000500762 203 ntBASIC-0.83□□□□□ -2.54
TPM1P09493 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 RNU6-291P-201ENST00000384720 107 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 RNA5SP300-201ENST00000391197 107 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 SNORD115-47-201ENST00000391226 86 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 RNU2-66P-201ENST00000410650 161 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 AC009161.1-201ENST00000417306 376 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 AC096531.1-201ENST00000419107 107 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.84□□□□□ -2.54
TPM1P09493 RPS29P24-201ENST00000486345 171 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 AC005899.2-201ENST00000584353 90 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 AC011921.3-201ENST00000605540 361 ntBASIC-0.84□□□□□ -2.54
TPM1P09493 SNORD14C-201ENST00000365382 88 ntBASIC-0.85□□□□□ -2.55
TPM1P09493 SNORA27-201ENST00000384323 126 ntBASIC-0.85□□□□□ -2.55
TPM1P09493 SNORA69.1-201ENST00000390904 137 ntBASIC-0.85□□□□□ -2.55
TPM1P09493 SNORD78.2-201ENST00000391076 69 ntBASIC-0.85□□□□□ -2.55
TPM1P09493 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.85□□□□□ -2.55
TPM1P09493 RN7SKP295-201ENST00000517264 153 ntBASIC-0.85□□□□□ -2.55
TPM1P09493 SNORD115-28-201ENST00000363931 81 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 RNY3P4-201ENST00000384428 101 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 MIR613-201ENST00000385248 95 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 SNORA36B-201ENST00000410438 131 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 AC024067.1-201ENST00000426199 223 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 SNORD126-201ENST00000459475 77 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.86□□□□□ -2.55
TPM1P09493 AC124312.5-201ENST00000604451 268 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 U7.6-201ENST00000610841 64 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 AC006157.1-201ENST00000611750 366 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 AL442067.1-201ENST00000613261 223 ntBASIC-0.86□□□□□ -2.55
TPM1P09493 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.87□□□□□ -2.55
TPM1P09493 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.87□□□□□ -2.55
TPM1P09493 MIR5706-201ENST00000579841 80 ntBASIC-0.87□□□□□ -2.55
TPM1P09493 MIR3611-201ENST00000584484 83 ntBASIC-0.87□□□□□ -2.55
TPM1P09493 RNU6-535P-201ENST00000384722 107 ntBASIC-0.88□□□□□ -2.55
TPM1P09493 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.88□□□□□ -2.55
TPM1P09493 RNA5SP127-201ENST00000411051 133 ntBASIC-0.88□□□□□ -2.55
TPM1P09493 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.88□□□□□ -2.55
TPM1P09493 AP001282.2-201ENST00000616149 309 ntBASIC-0.88□□□□□ -2.55
TPM1P09493 AC087588.2-201ENST00000617667 426 ntBASIC-0.88□□□□□ -2.55
TPM1P09493 RNU6-99P-201ENST00000364721 107 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 MIR548I3-201ENST00000408378 149 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 RNU6-938P-201ENST00000411285 103 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.89□□□□□ -2.55
TPM1P09493 RPL7P42-201ENST00000481005 679 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 RNU6-307P-201ENST00000516743 106 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 AC007751.1-201ENST00000529260 376 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 AL662814.1-201ENST00000617364 121 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 AC022140.2-201ENST00000623500 188 ntBASIC-0.89□□□□□ -2.55
TPM1P09493 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
TPM1P09493 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 U8.15-201ENST00000390947 134 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.9□□□□□ -2.55
TPM1P09493 RNU6-475P-201ENST00000516073 104 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 CR383656.4-201ENST00000546909 122 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 DEFB117-201ENST00000602356 141 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 Z99129.1-201ENST00000612510 255 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 AC010205.1-201ENST00000616668 449 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 MIR6514-201ENST00000622549 70 ntBASIC-0.9□□□□□ -2.55
TPM1P09493 MIR625-201ENST00000385047 85 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 SNORD77.3-201ENST00000391113 65 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 RNA5SP237-201ENST00000410414 113 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 MIR4659A-201ENST00000580269 81 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 MIR4491-201ENST00000581087 68 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 RN7SKP299-201ENST00000606679 301 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 AC011476.5-201ENST00000615594 130 ntBASIC-0.91□□□□□ -2.56
TPM1P09493 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 RNU6-708P-201ENST00000384217 107 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 SNORA75.1-201ENST00000391130 148 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 AC023449.1-201ENST00000454464 154 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 RNU2-11P-201ENST00000459191 187 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 RNU7-141P-201ENST00000459304 62 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 MTND5P34-201ENST00000568888 325 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 MIR3925-201ENST00000584674 77 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 AC005357.1-201ENST00000588399 301 ntBASIC-0.92□□□□□ -2.56
TPM1P09493 SNORD49B-201ENST00000365172 72 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 SNORA72.6-201ENST00000384520 129 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 RNU7-149P-201ENST00000516739 59 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 AP003072.1-201ENST00000531740 145 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 AC138749.4-201ENST00000563970 127 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 AL133255.1-201ENST00000606374 441 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms