Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-429P-201ENST00000384582 108 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 SNRPGP13-201ENST00000442212 177 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 AL158147.1-201ENST00000443970 75 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 RNU6-781P-201ENST00000516377 101 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 Y_RNA.692-201ENST00000516627 105 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 SNORD45.4-201ENST00000516629 73 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 RNA5SP82-201ENST00000516707 92 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 MIR4762-201ENST00000585261 75 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 AC108081.1-201ENST00000604358 221 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DOAP06340 RNU6-268P-201ENST00000364174 107 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 AL603914.1-201ENST00000401964 204 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 MIR548O-201ENST00000408583 114 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DOAP06340 SNORD13-201ENST00000459299 104 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 RNU6-1061P-201ENST00000516530 99 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 RNU6-1149P-201ENST00000516810 97 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 IGKV1-22-201ENST00000524313 326 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 AL022345.2-201ENST00000606307 135 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 MIR502-201ENST00000606349 86 ntBASIC2.09□□□□□ -2.07
HLA-DOAP06340 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DOAP06340 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DOAP06340 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DOAP06340 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 U8.5-201ENST00000364528 136 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 RNU6-1325P-201ENST00000364905 105 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 SNORD24-201ENST00000383884 75 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HLA-DOAP06340 SNORA48.1-201ENST00000390879 135 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 RNU11-5P-201ENST00000391216 129 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 CALM2P4-201ENST00000430810 426 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DOAP06340 RNA5SP236-201ENST00000516169 116 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 RNA5SP437-201ENST00000517249 129 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 AC090049.2-201ENST00000550377 109 ntBASIC2.08□□□□□ -2.08
HLA-DOAP06340 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DOAP06340 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DOAP06340 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DOAP06340 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DOAP06340 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DOAP06340 SNORD14E-201ENST00000364009 85 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 Y_RNA.273-201ENST00000364703 102 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 Y_RNA.547-201ENST00000384654 119 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 MIR802-201ENST00000390235 94 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 SUMO1P4-201ENST00000429430 302 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 SNORD36C-201ENST00000516733 66 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 SCARNA15-202ENST00000516881 127 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 Y_RNA.712-201ENST00000517011 92 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DOAP06340 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 Y_RNA.757-201ENST00000578934 114 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DOAP06340 MIR6129-201ENST00000616087 109 ntBASIC2.07□□□□□ -2.08
HLA-DOAP06340 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 snoU2-30.1-201ENST00000365012 70 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 SNORD18B-201ENST00000365659 72 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 MIR144-201ENST00000384886 86 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 RNU6-938P-201ENST00000411285 103 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 SNORD33.1-201ENST00000516213 88 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 IGLV3-17-201ENST00000519099 244 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 MIR4255-201ENST00000579351 72 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DOAP06340 AC006441.5-201ENST00000612680 209 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
HLA-DOAP06340 RNU6-112P-201ENST00000363599 104 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 RNU6-442P-201ENST00000383968 104 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 U8.16-201ENST00000391279 133 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 AL035461.1-201ENST00000421490 332 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 RNU6-126P-201ENST00000516685 103 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DOAP06340 AC133485.4-201ENST00000561835 220 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 AC138907.4-201ENST00000570107 226 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 AC087685.1-201ENST00000587507 141 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DOAP06340 MIR3914-2-201ENST00000637339 95 ntBASIC2.05□□□□□ -2.08
HLA-DOAP06340 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DOAP06340 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HLA-DOAP06340 RNU6-1292P-201ENST00000383856 107 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 Y_RNA.563-201ENST00000384707 108 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
HLA-DOAP06340 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 RNU2-7P-201ENST00000410794 178 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 Y_RNA.617-201ENST00000410920 90 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 AC108667.1-201ENST00000428618 249 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DOAP06340 Y_RNA.714-201ENST00000517065 90 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 MTND5P34-201ENST00000568888 325 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 MIR4529-201ENST00000578110 78 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 AC015726.2-201ENST00000620112 122 ntBASIC2.04□□□□□ -2.08
HLA-DOAP06340 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
HLA-DOAP06340 SNORA63.4-201ENST00000362763 126 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 SNORA63D-201ENST00000364359 132 ntBASIC2.03□□□□□ -2.08
HLA-DOAP06340 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms