Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 AC009161.1-201ENST00000417306 376 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 RPL39P25-201ENST00000449384 154 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 AC098826.2-201ENST00000452011 651 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 RNU6-437P-201ENST00000459408 95 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 AC087588.2-201ENST00000617667 426 ntBASIC-0.45□□□□□ -2.48
HLA-DQB2P05538 RNU6-403P-201ENST00000363163 104 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 SNORA18.1-201ENST00000363418 128 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 RNU6-99P-201ENST00000364721 107 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 RNU6-652P-201ENST00000365488 107 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 RNY3P4-201ENST00000384428 101 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 MTND1P2-201ENST00000430604 821 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 MIR4639-201ENST00000584938 69 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 AL670379.3-201ENST00000605040 251 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 AL080274.1-201ENST00000605565 220 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.46□□□□□ -2.48
HLA-DQB2P05538 MIR215-201ENST00000384858 110 ntBASIC-0.47□□□□□ -2.48
HLA-DQB2P05538 SNORA69.1-201ENST00000390904 137 ntBASIC-0.47□□□□□ -2.48
HLA-DQB2P05538 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.47□□□□□ -2.48
HLA-DQB2P05538 RNU7-53P-201ENST00000516705 60 ntBASIC-0.47□□□□□ -2.48
HLA-DQB2P05538 RNA5SP257-201ENST00000363023 116 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 MIR106A-201ENST00000384870 81 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 SNORD78.2-201ENST00000391076 69 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 RNU6-938P-201ENST00000411285 103 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 AC087499.4-201ENST00000448505 178 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 AL138752.1-201ENST00000452964 351 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 RN7SKP295-201ENST00000517264 153 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 AC006600.1-201ENST00000572529 153 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 AC005899.2-201ENST00000584353 90 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 DEFB117-201ENST00000602356 141 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 MIR6082-201ENST00000613604 109 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 AC244669.1-204ENST00000621564 178 ntBASIC-0.48□□□□□ -2.49
HLA-DQB2P05538 SNORD116-9-201ENST00000384000 95 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 SNORD116-3-201ENST00000384287 95 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 SNORD116-7-201ENST00000384404 95 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 SNORD116-5-201ENST00000384462 95 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 MIR329-2-201ENST00000385029 84 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 SNORA40.5-201ENST00000391061 128 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 MIR548K-201ENST00000408406 116 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 SNORA36B-201ENST00000410438 131 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 PDCL2P1-201ENST00000419302 352 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 RPS3AP52-201ENST00000435639 297 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 MTND3P10-201ENST00000450967 341 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 RNU6-765P-201ENST00000516916 99 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 AC007751.1-201ENST00000529260 376 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 AC109635.3-201ENST00000529536 185 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 AL133255.1-201ENST00000606374 441 ntBASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.49□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 MIR625-201ENST00000385047 85 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 MIR501-201ENST00000390204 84 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 SNORD115-47-201ENST00000391226 86 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 TRBVB-201ENST00000477100 408 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 MIR4659A-201ENST00000580269 81 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 AC124312.5-201ENST00000604451 268 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 AC245008.1-201ENST00000608123 476 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 AC078883.4-201ENST00000623218 367 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 AC022140.2-201ENST00000623500 188 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 MIR3974-201ENST00000637126 96 ntBASIC-0.5□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 SNORD115-28-201ENST00000363931 81 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 SNORA27-201ENST00000384323 126 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 RNU6-291P-201ENST00000384720 107 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 MIR548F5-201ENST00000408421 86 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 MTND1P1-201ENST00000445453 368 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 RPS29P24-201ENST00000486345 171 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 RNU6-180P-201ENST00000516697 61 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 AP001282.2-201ENST00000616149 309 ntBASIC-0.51□□□□□ -2.49
HLA-DQB2P05538 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 SNORA72.6-201ENST00000384520 129 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 RNU6-535P-201ENST00000384722 107 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 AC096531.1-201ENST00000419107 107 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 RNU7-141P-201ENST00000459304 62 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 RNU6-307P-201ENST00000516743 106 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 MTND5P34-201ENST00000568888 325 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 MIR4423-201ENST00000580922 80 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 MIR548AD-201ENST00000584780 82 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 PISRT1.1-201ENST00000616930 107 ntBASIC-0.52□□□□□ -2.49
HLA-DQB2P05538 SNORD81.1-201ENST00000363064 77 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms