Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.34□□□□□ -2.62
APOBP04114 RNU6-609P-201ENST00000365459 107 ntBASIC-1.34□□□□□ -2.62
APOBP04114 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.34□□□□□ -2.62
APOBP04114 AL137792.2-201ENST00000443484 235 ntBASIC-1.34□□□□□ -2.62
APOBP04114 RNU6-107P-201ENST00000516643 102 ntBASIC-1.34□□□□□ -2.62
APOBP04114 RNU6-64P-201ENST00000517119 105 ntBASIC-1.34□□□□□ -2.62
APOBP04114 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.34□□□□□ -2.62
APOBP04114 ELOCP20-201ENST00000422460 345 ntBASIC-1.34□□□□□ -2.62
APOBP04114 AL049829.1-201ENST00000465411 156 ntBASIC-1.34□□□□□ -2.62
APOBP04114 RNU6-323P-201ENST00000521915 107 ntBASIC-1.34□□□□□ -2.62
APOBP04114 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.34□□□□□ -2.62
APOBP04114 SNORA49-201ENST00000386157 136 ntBASIC-1.34□□□□□ -2.62
APOBP04114 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.34□□□□□ -2.62
APOBP04114 AC069113.1-201ENST00000517763 267 ntBASIC-1.34□□□□□ -2.62
APOBP04114 SNORD115-34-201ENST00000362441 82 ntBASIC-1.35□□□□□ -2.62
APOBP04114 SNORA62.4-201ENST00000365504 151 ntBASIC-1.35□□□□□ -2.62
APOBP04114 RNU6-946P-201ENST00000383878 107 ntBASIC-1.35□□□□□ -2.62
APOBP04114 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.35□□□□□ -2.62
APOBP04114 AL353691.2-201ENST00000443795 59 ntBASIC-1.35□□□□□ -2.62
APOBP04114 MIR3129-201ENST00000581095 76 ntBASIC-1.35□□□□□ -2.62
APOBP04114 RPS3AP52-201ENST00000435639 297 ntBASIC-1.35□□□□□ -2.63
APOBP04114 AL359881.1-201ENST00000602916 267 ntBASIC-1.35□□□□□ -2.63
APOBP04114 AC137590.2-201ENST00000619709 240 ntBASIC-1.35□□□□□ -2.63
APOBP04114 AC231657.1-201ENST00000624313 397 ntBASIC-1.35□□□□□ -2.63
APOBP04114 MIR376A2-201ENST00000636782 80 ntBASIC-1.35□□□□□ -2.63
APOBP04114 SNORA20B-201ENST00000384220 132 ntBASIC-1.35□□□□□ -2.63
APOBP04114 SNORD12C-201ENST00000386307 89 ntBASIC-1.35□□□□□ -2.63
APOBP04114 RNA5SP494-201ENST00000410653 129 ntBASIC-1.35□□□□□ -2.63
APOBP04114 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.35□□□□□ -2.63
APOBP04114 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.35□□□□□ -2.63
APOBP04114 AC022616.4-201ENST00000522985 181 ntBASIC-1.35□□□□□ -2.63
APOBP04114 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.35□□□□□ -2.63
APOBP04114 RNU7-181P-201ENST00000517234 74 ntBASIC-1.35□□□□□ -2.63
APOBP04114 SNORD87-201ENST00000364849 89 ntBASIC-1.36□□□□□ -2.63
APOBP04114 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.36□□□□□ -2.63
APOBP04114 MIR578-201ENST00000384828 96 ntBASIC-1.36□□□□□ -2.63
APOBP04114 MIR652-201ENST00000385278 98 ntBASIC-1.36□□□□□ -2.63
APOBP04114 SNRPGP8-201ENST00000454064 226 ntBASIC-1.36□□□□□ -2.63
APOBP04114 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.36□□□□□ -2.63
APOBP04114 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.36□□□□□ -2.63
APOBP04114 RNU6-371P-201ENST00000364283 108 ntBASIC-1.36□□□□□ -2.63
APOBP04114 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.36□□□□□ -2.63
APOBP04114 RNU6-602P-201ENST00000411155 105 ntBASIC-1.36□□□□□ -2.63
APOBP04114 RNU6-397P-201ENST00000516226 104 ntBASIC-1.36□□□□□ -2.63
APOBP04114 MIR1322-201ENST00000638013 71 ntBASIC-1.36□□□□□ -2.63
APOBP04114 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.37□□□□□ -2.63
APOBP04114 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.37□□□□□ -2.63
APOBP04114 RNU2-14P-201ENST00000411053 191 ntBASIC-1.37□□□□□ -2.63
APOBP04114 MIR6874-201ENST00000635894 71 ntBASIC-1.37□□□□□ -2.63
APOBP04114 RNU6-393P-201ENST00000384475 107 ntBASIC-1.37□□□□□ -2.63
APOBP04114 RNU6-141P-201ENST00000410499 105 ntBASIC-1.37□□□□□ -2.63
APOBP04114 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.37□□□□□ -2.63
APOBP04114 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.37□□□□□ -2.63
APOBP04114 AC068137.4-201ENST00000638485 296 ntBASIC-1.37□□□□□ -2.63
APOBP04114 SNORA72.6-201ENST00000384520 129 ntBASIC-1.37□□□□□ -2.63
APOBP04114 RNU2-29P-201ENST00000410423 189 ntBASIC-1.37□□□□□ -2.63
APOBP04114 MIR4490-201ENST00000582647 84 ntBASIC-1.37□□□□□ -2.63
APOBP04114 RNA5SP403-201ENST00000363598 108 ntBASIC-1.37□□□□□ -2.63
APOBP04114 MIR626-201ENST00000385032 94 ntBASIC-1.37□□□□□ -2.63
APOBP04114 AC068339.1-201ENST00000526965 141 ntBASIC-1.37□□□□□ -2.63
APOBP04114 RNU6-924P-201ENST00000362926 108 ntBASIC-1.38□□□□□ -2.63
APOBP04114 SNORD113-7-201ENST00000363762 77 ntBASIC-1.38□□□□□ -2.63
APOBP04114 MIR7-1-201ENST00000384871 110 ntBASIC-1.38□□□□□ -2.63
APOBP04114 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.38□□□□□ -2.63
APOBP04114 RNU6-850P-201ENST00000516934 103 ntBASIC-1.38□□□□□ -2.63
APOBP04114 AC108081.1-201ENST00000604358 221 ntBASIC-1.38□□□□□ -2.63
APOBP04114 AL136370.1-201ENST00000608166 691 ntBASIC-1.38□□□□□ -2.63
APOBP04114 MIR8055-201ENST00000610739 97 ntBASIC-1.38□□□□□ -2.63
APOBP04114 SNORD115-15-201ENST00000364809 81 ntBASIC-1.38□□□□□ -2.63
APOBP04114 RNY3P13-201ENST00000365542 102 ntBASIC-1.38□□□□□ -2.63
APOBP04114 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.38□□□□□ -2.63
APOBP04114 AL606923.1-201ENST00000406616 190 ntBASIC-1.38□□□□□ -2.63
APOBP04114 MTND1P24-201ENST00000552175 861 ntBASIC-1.38□□□□□ -2.63
APOBP04114 AC109347.2-201ENST00000610220 349 ntBASIC-1.38□□□□□ -2.63
APOBP04114 AC120349.2-201ENST00000625002 298 ntBASIC-1.38□□□□□ -2.63
APOBP04114 SNORA20.2-201ENST00000383922 131 ntBASIC-1.38□□□□□ -2.63
APOBP04114 MIR548I2-201ENST00000408348 149 ntBASIC-1.38□□□□□ -2.63
APOBP04114 RNU6-415P-201ENST00000516252 97 ntBASIC-1.38□□□□□ -2.63
APOBP04114 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.38□□□□□ -2.63
APOBP04114 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.39□□□□□ -2.63
APOBP04114 RNU6-746P-201ENST00000384112 109 ntBASIC-1.39□□□□□ -2.63
APOBP04114 MTCO1P29-201ENST00000496868 288 ntBASIC-1.39□□□□□ -2.63
APOBP04114 SNORD114-4-201ENST00000363962 75 ntBASIC-1.39□□□□□ -2.63
APOBP04114 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.39□□□□□ -2.63
APOBP04114 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.39□□□□□ -2.63
APOBP04114 FGF7P4-201ENST00000509595 295 ntBASIC-1.39□□□□□ -2.63
APOBP04114 MTND5P40-201ENST00000559945 246 ntBASIC-1.39□□□□□ -2.63
APOBP04114 MIR5693-201ENST00000577722 73 ntBASIC-1.39□□□□□ -2.63
APOBP04114 AC145350.1-201ENST00000567426 208 ntBASIC-1.39□□□□□ -2.63
APOBP04114 RMST_10.1-201ENST00000616309 154 ntBASIC-1.39□□□□□ -2.63
APOBP04114 MTND4P3-201ENST00000417829 541 ntBASIC-1.39□□□□□ -2.63
APOBP04114 MIR4460-201ENST00000577862 86 ntBASIC-1.39□□□□□ -2.63
APOBP04114 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.39□□□□□ -2.63
APOBP04114 AC073343.1-201ENST00000328239 651 ntBASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.4□□□□□ -2.63
APOBP04114 RNU6-692P-201ENST00000384496 107 ntBASIC-1.4□□□□□ -2.63
APOBP04114 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.4□□□□□ -2.63
APOBP04114 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.4□□□□□ -2.63
APOBP04114 RNU6-720P-201ENST00000516363 108 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 255.1 ms