Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL117342.1-201ENST00000404861 406 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 MIR1253-201ENST00000408273 105 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 AC060773.1-201ENST00000421698 310 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 SNORD33.1-201ENST00000516213 88 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 Y_RNA.690-201ENST00000516603 95 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-197P-201ENST00000516680 100 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU7-149P-201ENST00000516739 59 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU7-116P-201ENST00000516940 62 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU2-60P-201ENST00000517290 128 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 MIR3129-201ENST00000581095 76 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-1298P-201ENST00000362456 101 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-486P-201ENST00000363116 107 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-271P-201ENST00000363858 105 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-978P-201ENST00000364371 103 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-1144P-201ENST00000384247 104 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 SNORA72-201ENST00000384339 132 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 MIR1263-201ENST00000408324 86 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU4-43P-201ENST00000410628 137 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.56□□□□□ -2.16
COL2A1P02458 AL445687.1-201ENST00000439946 251 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 Y_RNA.692-201ENST00000516627 105 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 MIR5688-201ENST00000580619 83 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 AC073413.2-201ENST00000604332 360 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 AC245884.12-201ENST00000615364 59 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.56□□□□□ -2.16
COL2A1P02458 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL2A1P02458 Y_RNA.35-201ENST00000362601 101 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 RNU6-674P-201ENST00000363831 107 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 SNORD18B-201ENST00000365659 72 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 SNORA6-201ENST00000384033 151 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 RNY3P5-201ENST00000384127 102 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 RNA5SP496-201ENST00000391240 109 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AC010154.1-201ENST00000425857 269 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AC245047.4-201ENST00000433189 144 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AL158147.1-201ENST00000443970 75 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AC245102.2-201ENST00000448956 180 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AC097462.1-201ENST00000514125 324 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 SNORA18.4-201ENST00000516440 124 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 RNU6-1096P-201ENST00000517089 102 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 SCARNA3-201ENST00000517097 143 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 RNU6-1270P-201ENST00000517128 108 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AC084364.2-201ENST00000546924 395 ntBASIC1.55□□□□□ -2.16
COL2A1P02458 AC008555.8-201ENST00000623602 2168 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 MIR340-201ENST00000362125 95 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 SNORD114-6-201ENST00000364393 72 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 RNU6-597P-201ENST00000365620 102 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 RNU6-1083P-201ENST00000384022 107 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 SNORD72-201ENST00000390994 80 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 HMGN1P33-201ENST00000432945 451 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.54□□□□□ -2.16
COL2A1P02458 MTCO1P44-201ENST00000441935 243 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 AC016925.1-201ENST00000458303 298 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 Y_RNA.666-201ENST00000516187 112 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 Y_RNA.709-201ENST00000516952 92 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 IGKV1-22-201ENST00000524313 326 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 Y_RNA.757-201ENST00000578934 114 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 AC007229.1-201ENST00000590455 412 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 AL355297.2-201ENST00000604792 129 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 RPL17P51-201ENST00000605218 238 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 AL021707.8-201ENST00000609428 183 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 MIR203B-201ENST00000636080 86 ntBASIC1.54□□□□□ -2.16
COL2A1P02458 MIR450A1-201ENST00000362262 91 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 RNU6-1235P-201ENST00000384559 107 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 RNU2-55P-201ENST00000411146 174 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 AC023449.1-201ENST00000454464 154 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 SNORD11-201ENST00000459124 84 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 RNU6-498P-201ENST00000459468 107 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 NDUFA4P2-201ENST00000489989 244 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 AC023141.11-201ENST00000508864 202 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 AC093259.1-201ENST00000509755 300 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 SNORA4.4-201ENST00000515921 135 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.53□□□□□ -2.16
COL2A1P02458 AC131055.1-201ENST00000584626 316 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 AL022345.2-201ENST00000606307 135 ntBASIC1.53□□□□□ -2.16
COL2A1P02458 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.17
COL2A1P02458 AL159152.1-201ENST00000635019 2587 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.52□□□□□ -2.17
COL2A1P02458 AC080100.1-201ENST00000624239 5356 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 SNORD114-7-201ENST00000362520 77 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 SNORD115-3-201ENST00000363100 82 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 RNU6-147P-201ENST00000383983 107 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 SNORD61-201ENST00000384252 73 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 MIR548A3-201ENST00000385297 97 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 AL357134.1-201ENST00000445848 426 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 SNORD77.4-201ENST00000516158 81 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 MIR4679-2-201ENST00000578358 77 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 MIR3613-201ENST00000579844 87 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 AC105245.1-201ENST00000581934 244 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.52□□□□□ -2.17
COL2A1P02458 JPX_2.1-201ENST00000614161 69 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 MIR5739-201ENST00000619803 80 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 AL121890.5-201ENST00000620848 304 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms