Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR8066-201ENST00000617280 78 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 FTX_2.1-201ENST00000618816 94 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR6828-201ENST00000636181 60 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AL162726.3-218ENST00000636401 95 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC068137.3-201ENST00000639191 341 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC091304.10-201ENST00000641554 121 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 SNORA63.5-201ENST00000363548 123 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 RNU6-811P-201ENST00000384069 107 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 RNU6-318P-201ENST00000384283 103 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 SNORD28-201ENST00000384706 75 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 MIR588-201ENST00000384900 83 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
COL1A1P02452 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 snoU13.2-201ENST00000459201 104 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 MIR2355-201ENST00000517199 87 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 MIR2681-201ENST00000581814 105 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 RNU6-86P-201ENST00000606534 107 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 MIR3666-201ENST00000607845 111 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 AL391099.1-201ENST00000624635 187 ntBASIC-0.3□□□□□ -2.46
COL1A1P02452 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-403P-201ENST00000363163 104 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 SNORD114-25-201ENST00000363742 72 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 SNORA25.7-201ENST00000364375 127 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 SNORA24-201ENST00000384096 131 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-306P-201ENST00000384617 107 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 MIR196A1-201ENST00000388006 70 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-332P-201ENST00000391193 108 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 MTCO3P40-201ENST00000392516 676 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-710P-201ENST00000410424 105 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL1A1P02452 USP9YP30-201ENST00000430729 455 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL1A1P02452 AL445193.1-201ENST00000441183 141 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-436P-201ENST00000516171 114 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU6-135P-201ENST00000516769 101 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 RNU1-54P-201ENST00000517181 120 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 AP001328.1-201ENST00000528550 176 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL1A1P02452 MIR5701-3-201ENST00000578890 82 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 MIR5701-1-201ENST00000585138 82 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 MIR5701-2-201ENST00000615634 82 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 AL391262.2-201ENST00000622466 494 ntBASIC-0.31□□□□□ -2.46
COL1A1P02452 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 SNORA75-201ENST00000384158 137 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 RNU6-601P-201ENST00000384540 107 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 RNU6-913P-201ENST00000390913 95 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 SNORA75.4-201ENST00000391278 119 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 SNORD93-201ENST00000408813 74 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 FCF1P9-201ENST00000412546 282 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 BX276092.1-201ENST00000427368 251 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 SEPT14P3-201ENST00000439401 183 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 AL732372.2-207ENST00000445840 183 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL1A1P02452 SEPT14P2-201ENST00000453405 183 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 SNORD5.1-201ENST00000458800 75 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 SEPT14P4-201ENST00000513445 186 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 FO082796.1-201ENST00000523795 183 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.32□□□□□ -2.46
COL1A1P02452 AC093424.1-201ENST00000604999 338 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 AC245008.1-201ENST00000608123 476 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 AL050303.3-201ENST00000613704 284 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 AL162376.1-201ENST00000624117 175 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 MIR6863-201ENST00000636112 90 ntBASIC-0.32□□□□□ -2.46
COL1A1P02452 MIR30D-201ENST00000362283 70 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU6-961P-201ENST00000363893 105 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU4-84P-201ENST00000364200 139 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU6-708P-201ENST00000384217 107 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU6-842P-201ENST00000384269 107 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 MIR516B1-201ENST00000385211 90 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 MT-TF-201ENST00000387314 71 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
COL1A1P02452 RNU4-83P-201ENST00000410863 133 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 CHEK2P4-201ENST00000450340 246 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 AL500527.2-201ENST00000454105 95 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.33□□□□□ -2.46
COL1A1P02452 SNORD38.3-201ENST00000516599 73 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 AC024405.2-202ENST00000532731 184 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 CR383656.4-201ENST00000546909 122 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 MIR5188-201ENST00000583467 113 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 NBR2-204ENST00000587322 63 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 AL162413.1-201ENST00000603198 110 ntBASIC-0.33□□□□□ -2.46
COL1A1P02452 U4.1-201ENST00000620349 87 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms