Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNORD18.1-201ENST00000363807 70 ntBASIC-1.15□□□□□ -2.59
TNFP01375 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.15□□□□□ -2.59
TNFP01375 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.15□□□□□ -2.59
TNFP01375 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.15□□□□□ -2.59
TNFP01375 SNORA72.6-201ENST00000384520 129 ntBASIC-1.15□□□□□ -2.59
TNFP01375 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.15□□□□□ -2.59
TNFP01375 MIR652-201ENST00000385278 98 ntBASIC-1.15□□□□□ -2.59
TNFP01375 MTATP6P18-201ENST00000417994 673 ntBASIC-1.15□□□□□ -2.59
TNFP01375 MTATP6P17-201ENST00000431030 672 ntBASIC-1.15□□□□□ -2.59
TNFP01375 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.15□□□□□ -2.59
TNFP01375 MTND4LP18-201ENST00000526864 291 ntBASIC-1.15□□□□□ -2.59
TNFP01375 MIR4703-201ENST00000577728 79 ntBASIC-1.15□□□□□ -2.59
TNFP01375 AL662814.1-201ENST00000617364 121 ntBASIC-1.15□□□□□ -2.59
TNFP01375 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD115-12-201ENST00000362583 82 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD115-9-201ENST00000362912 82 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD50.1-201ENST00000362987 71 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD115-19-201ENST00000363098 82 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD115-18-201ENST00000363293 82 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNY1P11-201ENST00000363759 113 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNU4-10P-201ENST00000364383 140 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD115-17-201ENST00000364612 82 ntBASIC-1.16□□□□□ -2.6
TNFP01375 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD115-20-201ENST00000365099 82 ntBASIC-1.16□□□□□ -2.6
TNFP01375 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORA20.2-201ENST00000383922 131 ntBASIC-1.16□□□□□ -2.6
TNFP01375 MIR519E-201ENST00000385075 84 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNU6-588P-201ENST00000410281 105 ntBASIC-1.16□□□□□ -2.6
TNFP01375 MIR1468-201ENST00000410600 86 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RPS27AP14-201ENST00000422868 454 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNU6-751P-201ENST00000516382 101 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNU6-759P-201ENST00000516740 103 ntBASIC-1.16□□□□□ -2.6
TNFP01375 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.16□□□□□ -2.6
TNFP01375 MIR4756-201ENST00000577874 78 ntBASIC-1.16□□□□□ -2.6
TNFP01375 CPDP1-201ENST00000579660 283 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AC005771.1-201ENST00000585581 349 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AC011373.1-201ENST00000607270 237 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AC072046.2-201ENST00000618366 268 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AC069503.3-201ENST00000618674 145 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AC079248.2-201ENST00000623779 326 ntBASIC-1.16□□□□□ -2.6
TNFP01375 AC099654.13-201ENST00000639774 207 ntBASIC-1.16□□□□□ -2.6
TNFP01375 SNORD114-7-201ENST00000362520 77 ntBASIC-1.17□□□□□ -2.6
TNFP01375 RNY4P27-201ENST00000363341 96 ntBASIC-1.17□□□□□ -2.6
TNFP01375 RNU6-454P-201ENST00000364292 107 ntBASIC-1.17□□□□□ -2.6
TNFP01375 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.17□□□□□ -2.6
TNFP01375 SNORD115-23-201ENST00000364461 82 ntBASIC-1.17□□□□□ -2.6
TNFP01375 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.17□□□□□ -2.6
TNFP01375 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.17□□□□□ -2.6
TNFP01375 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.17□□□□□ -2.6
TNFP01375 AL603910.2-201ENST00000407268 136 ntBASIC-1.17□□□□□ -2.6
TNFP01375 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.17□□□□□ -2.6
TNFP01375 MTND1P11-201ENST00000456661 876 ntBASIC-1.17□□□□□ -2.6
TNFP01375 AC016550.1-201ENST00000505348 785 ntBASIC-1.17□□□□□ -2.6
TNFP01375 AC021146.9-201ENST00000512503 156 ntBASIC-1.17□□□□□ -2.6
TNFP01375 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.17□□□□□ -2.6
TNFP01375 MIR3941-201ENST00000582572 103 ntBASIC-1.17□□□□□ -2.6
TNFP01375 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.17□□□□□ -2.6
TNFP01375 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.18□□□□□ -2.6
TNFP01375 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.18□□□□□ -2.6
TNFP01375 RNU6-280P-201ENST00000364145 104 ntBASIC-1.18□□□□□ -2.6
TNFP01375 SNORD116-12-201ENST00000384468 92 ntBASIC-1.18□□□□□ -2.6
TNFP01375 SNORA26.6-201ENST00000391256 115 ntBASIC-1.18□□□□□ -2.6
TNFP01375 MRPL42P2-201ENST00000403169 426 ntBASIC-1.18□□□□□ -2.6
TNFP01375 RNU4-55P-201ENST00000410731 137 ntBASIC-1.18□□□□□ -2.6
TNFP01375 RNU6-938P-201ENST00000411285 103 ntBASIC-1.18□□□□□ -2.6
TNFP01375 MTND2P18-201ENST00000419962 1030 ntBASIC-1.18□□□□□ -2.6
TNFP01375 AC104850.1-201ENST00000435940 476 ntBASIC-1.18□□□□□ -2.6
TNFP01375 MTCO2P16-201ENST00000436962 677 ntBASIC-1.18□□□□□ -2.6
TNFP01375 RPL30P10-201ENST00000488148 337 ntBASIC-1.18□□□□□ -2.6
TNFP01375 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.18□□□□□ -2.6
TNFP01375 PIGPP4-201ENST00000584447 307 ntBASIC-1.18□□□□□ -2.6
TNFP01375 DISC2.1-201ENST00000612827 205 ntBASIC-1.18□□□□□ -2.6
TNFP01375 AC027807.2-201ENST00000616099 408 ntBASIC-1.18□□□□□ -2.6
TNFP01375 RNU6-509P-201ENST00000363519 107 ntBASIC-1.19□□□□□ -2.6
TNFP01375 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.19□□□□□ -2.6
TNFP01375 RNU6-312P-201ENST00000364629 107 ntBASIC-1.19□□□□□ -2.6
TNFP01375 RNU6-442P-201ENST00000383968 104 ntBASIC-1.19□□□□□ -2.6
TNFP01375 SNORA18-201ENST00000384416 132 ntBASIC-1.19□□□□□ -2.6
TNFP01375 RNY3P9-201ENST00000384727 106 ntBASIC-1.19□□□□□ -2.6
TNFP01375 MIR124-2-201ENST00000385081 109 ntBASIC-1.19□□□□□ -2.6
TNFP01375 RNU6-337P-201ENST00000391243 106 ntBASIC-1.19□□□□□ -2.6
TNFP01375 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.19□□□□□ -2.6
TNFP01375 AC108019.1-201ENST00000512540 175 ntBASIC-1.19□□□□□ -2.6
TNFP01375 SNORD63.1-201ENST00000516178 80 ntBASIC-1.19□□□□□ -2.6
TNFP01375 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.19□□□□□ -2.6
TNFP01375 RNU6-958P-201ENST00000516995 106 ntBASIC-1.19□□□□□ -2.6
TNFP01375 AC141846.1-201ENST00000568348 142 ntBASIC-1.19□□□□□ -2.6
TNFP01375 MIR5583-1-201ENST00000580941 59 ntBASIC-1.19□□□□□ -2.6
TNFP01375 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.19□□□□□ -2.6
TNFP01375 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.2□□□□□ -2.6
TNFP01375 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.2□□□□□ -2.6
TNFP01375 RNU6-484P-201ENST00000384016 107 ntBASIC-1.2□□□□□ -2.6
TNFP01375 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.2□□□□□ -2.6
TNFP01375 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.2□□□□□ -2.6
TNFP01375 RNY4P36-201ENST00000391116 96 ntBASIC-1.2□□□□□ -2.6
TNFP01375 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.2□□□□□ -2.6
TNFP01375 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.2□□□□□ -2.6
TNFP01375 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms